LOCUS 1770 7015 bp DNA circular 29-JUL-2013 FEATURES Location/Qualifiers CDS 909..1937 /note="HYG" CDS 1977..3107 /note="HSVTK" misc_feature 3149..4190 /note="DOWN targeting for MCM-BP" misc_feature 40..689 /note="UP targeting for MCM-BP" repeat_unit 695..728 /note="loxP" repeat_unit 3114..3147 /note="loxP" primer_bind complement(1935..1958) /note="oligo #44" misc_difference 738..908 /note="Procyclin SAS" misc_feature 1941..1970 /note="Ty1" source 1..7015 /dnas_title="1770 deletion" ORIGIN 1 TCCCCGCGCG TTGGCCGATT CATTAATGCA GCTGtcgacg ggagaagcgt atggcactga 61 tgaagctatt tgacaactac cagctgcaaa tagaacaaaa tcagagggag aactgcgaga 121 gtttagcact gctgaagtca gttgatgatg ccacaatggc gtatgtcttg aagcaaaggg 181 atcaagaggt ggtagataaa atatgtctat ggaagggtgc atatttagag ggtgataaac 241 ttttacgggc actactcaag cgctatcaac cgttccagcg gggagacgag aagtttgtct 301 cccatgtcat tggatacttg aacaaagggc cgcatgtgca agaaccactt gatatatggc 361 ttgattagtg atgtctgttg ttgttgtatt caggtggcaa tctccacctc aaatgtagtt 421 agacatcatc agtgccgcct ttatttattt atttttgtat ttttgcttcc ctaccctcta 481 catttgatac atgcgcactt ttcatgtggg gaacacttcg ctacctgtga ttttatgtac 541 gttgcaactg tcttcttttt tttttttttt gtggaaatag tagtatactt gcgtgccccc 601 cttttttttc acagttctac tactggaaag atgagaggat ttggcgaagc tctttttctt 661 ttttcattta ctttctgaag aagtgcagaA GCTTATAACT TCGTATAGCA TACATTATAC 721 GAAGTTATac cggtACAcGT TCTCGTCggc cggccGCTGC ACGCGCCTTC GAGTTTTTTT 781 TCCTTTTCCC CATTTTTTTC AACTTGAAGa CTTCAATTAC ACCAAAAAAT AAAATTCACA 841 AACTTGGtAT TCCTTTGTGT TACATTCTTG ATCGCTCGCA CTGACATTAC agatctTACT 901 GTTGGTAAAT GATGAAAAAG CCTGAACTCA CCGCGACGTC TGTCGAGAAG TTTCTGATCG 961 AAAAGTTCGA CAGCGTCTCC GACCTGATGC AGCTCTCGGA GGGCGAAGAA TCTCGTGCTT 1021 TCAGCTTCGA TGTAGGAGGG CGTGGATATG TCCTGCGGGT AAATAGCTGC GCCGATGGTT 1081 TCTACAAAGA TCGTTATGTT TATCGGCACT TTGCATCGGC CGCGCTCCCG ATTCCGGAAG 1141 TGCTTGACAT TGGGGAATTC AGCGAGAGCC TGACCTATTG CATCTCCCGC CGTGCACAGG 1201 GTGTCACGTT GCAAGACCTG CCTGAAACCG AACTGCCCGC TGTTCTGCAG CCGGTCGCGG 1261 AGGCCATGGA TGCGATCGCT GCGGCCGATC TTAGCCAGAC GAGCGGGTTC GGCCCATTCG 1321 GACCGCAAGG AATCGGTCAA TACACTACAT GGCGTGATTT CATATGCGCG ATTGCTGATC 1381 CCCATGTGTA TCACTGGCAA ACTGTGATGG ACGACACCGT CAGTGCGTCC GTCGCGCAGG 1441 CTCTCGATGA GCTGATGCTT TGGGCCGAGG ACTGCCCCGA AGTCCGGCAC CTCGTGCACG 1501 CGGATTTCGG CTCCAACAAT GTCCTGACGG ACAATGGCCG CATAACAGCG GTCATTGACT 1561 GGAGCGAGGC GATGTTCGGG GATTCCCAAT ACGAGGTCGC CAACATCTTC TTCTGGAGGC 1621 CGTGGTTGGC TTGTATGGAG CAGCAGACGC GCTACTTCGA GCGGAGGCAT CCGGAGCTTG 1681 CAGGATCGCC GCGGCTCCGG GCGTATATGC TCCGCATTGG TCTTGACCAA CTCTATCAGA 1741 GCTTGGTTGA CGGCAATTTC GATGATGCAG CTTGGGCGCA GGGTCGATGC GACGCAATCG 1801 TCCGATCCGG AGCCGGGACT GTCGGGCGTA CACAAATCGC CCGCAGAAGC GCGGCCGTCT 1861 GGACCGATGG CTGTGTAGAA GTACTCGCCG ATAGTGGAAA CCGACGCCCC AGCACTCGTC 1921 CGAGGGCAAA GGAATCTAGA GAAGTCCATA CTAACCAGGA CCCACTTGAC GCCACCATGG 1981 CCTCGTACCC CGGCCATCAA CACGCGTCTG CGTTCGACCA GGCTGCGCGT TCTCGCGGCC 2041 ATAGCAACCG ACGTACGGCG TTGCGCCCTC GCCGGCAGCA AGAAGCCACG GAAGTCCGCC 2101 CGGAGCAGAA AATGCCCACG CTACTGCGGG TTTATATAGA CGGTCCCCAC GGGATGGGGA 2161 AAACCACCAC CACGCAACTG CTGGTGGCCC TGGGTTCGCG CGACGATATC GTCTACGTAC 2221 CCGAGCCGAT GACTTACTGG CGGGTGCTGG GGGCTTCCGA GACAATCGCG AACATCTACA 2281 CCACACAACA CCGCCTCGAC CAGGGTGAGA TATCGGCCGG GGACGCGGCG GTGGTAATGA 2341 CAAGCGCCCA GATAACAATG GGCATGCCTT ATGCCGTGAC CGACGCCGTT CTGGCTCCTC 2401 ATATCGGGGG GGAGGCTGGG AGCTCACATG CCCCGCCCCC GGCCCTCACC CTCATCTTCG 2461 ACCGCCATCC CATCGCCGCC CTCCTGTGCT ACCCGGCCGC GCGGTACCTT ATGGGCAGCA 2521 TGACCCCCCA GGCCGTGCTG GCGTTCGTGG CCCTCATCCC GCCGACCTTG CCCGGCACCA 2581 ACATCGTGCT TGGGGCCCTT CCGGAGGACA GACACATCGA CCGCCTGGCC AAACGCCAGC 2641 GCCCCGGCGA GCGGCTGGAC CTGGCTATGC TGGCTGCGAT TCGCCGCGTT TACGGGCTAC 2701 TTGCCAATAC GGTGCGGTAT CTGCAGTGCG GCGGGTCGTG GCGGGAGGAC TGGGGACAGC 2761 TTTCGGGGAC GGCCGTGCCG CCCCAGGGTG CCGAGCCCCA GAGCAACGCG GGCCCACGAC 2821 CCCATATCGG GGACACGTTA TTTACCCTGT TTCGGGCCCC CGAGTTGCTG GCCCCCAACG 2881 GCGACCTGTA TAACGTGTTT GCCTGGGCCT TGGACGTCTT GGCCAAACGC CTCCGTTCCA 2941 TGCACGTCTT TATCCTGGAT TACGACCAAT CGCCCGCCGG CTGCCGGGAC GCCCTGCTGC 3001 AACTTACCTC CGGGATGGTC CAGACCCACG TCACCACCCC CGGCTCCATA CCGACGATAT 3061 GCGACCTGGC GCGCACGTTT GCCCGGGAGA TGGGGGAGGC TAACTGAGAA TTCATAACTT 3121 CGTATAGCAT ACATTATACG AAGTTATGga tcctggctgc ggtgctgggt ggatcacaaa 3181 gcaagtgtgt gcagcatacc caacatcctt cttcccaccc gttggttctt cgtttaccta 3241 ctctgttata gtagtaatag atgccgctgt cttggttaag cacttaacct gtgactctcc 3301 ctgctggtta gtgctgtact tcctacacaa acatacccgc ctctaacttg aatcgttctc 3361 tttcaactcg ttttgcattc ttttctcttt ctctcactct ctctcacatt catttgctgc 3421 atgcgcatat tatcctgact actgatgcat acaatttata ttgaagaagg taaatagagc 3481 atatcaacag tttaaaaaaa aggccaaata acgtaaagta acatattaca tttttttttt 3541 ttgaaagtgt cgttggatct cgtgacaaca gaataacaca gaaggaaaaa gcacttaaca 3601 ttttggacat gtcacttgtg gaggttttgc cgaactactt cactctttcg aaggactcac 3661 cccttcggaa gaagttcgaa aaggtgtaca aatggtattc accagccttt tcgcctcacg 3721 atgttccgcg ctttgctgag gtggggaata tcaccgaaaa tcctgaagtg atgcgcggca 3781 ttcgagactt cttcgttgac cgctataaaa atcttcagca gcccatcacc cacattttgg 3841 ggtttgactc tcgtggtttt ctgcttggac caatgattgc agtggagctg aacgtgcctt 3901 ttgtactgat aaggaaggcg aacaaaatcg ctggtgttat cattaagagt gaaccttaca 3961 cgaaggaata cgccgcagaa tcagaggagt gcatgaccgt tcgcttcggg agctttgaca 4021 agaattctcg cgttgttctc atcgatgatg tgattgccac tggtggtacc atgcttgcgg 4081 gagtgcaact tgttgatgca tgtggtgcca ctcttgtgga agtggcgggt attctcggcc 4141 tcactttcct caaaggaacg caaactagta aaaATCACTA GTGAATTCGC gGCCgcCAGG 4201 TTGGTTAGGA AGGGGGGATG ATGTAAAAGA AGAAAATGGG GGGATTCGAG CCCCCTTGCA 4261 GGCATGCAAG CTAGCTTGTA TTCTATAGTG TCACCTAAAT CGTATGTGTA TGATACATAA 4321 GGTTATGTAT TAATTGTAGC CGCGTTCTAA CGACAATATG TACAAGCCTA ATTGTGTAGC 4381 ATCTGGCTTA CTGAAGCAGA CCCTATCATC TCTCTCGTAA ACTGCCGTCA GAGTCGGTTT 4441 GGTTGGACGA ACCTTCTGAG TTTCTGGTAA CGCCGTTCCG CACCCCGGAA ATGGTCAGCG 4501 AACCAATCAG CAGGGTCATC GCTAGCCAGA TCCTCTACGC CGGACGCATC GTGGCCGGCA 4561 TCACCGGCGC CACAGGTGCG GTTGCTGGCG CCTATATCGC CGACATCACC GATGGGGAAG 4621 ATCGGGCTCG CCACTTCGGG CTCATGAGCG CTTGTTTCGG CGTGGGTATG GTGGCAGGCC 4681 CCGTGGCCGG GGGACTGTTG GGCGCCATCT CCTTGCACCA TTCCTTGCGG CGGCGGTGCT 4741 CAACGGCCTC AACCTACTAC TGGGCTGCTT CCTAATGCAG GAGTCGCATA AGGGAGAGCG 4801 TCGATATGGT GCACTCTCAG TACAATCTGC TCTGATGCCG CATAGTTAAG CCAGCCCCGA 4861 CACCCGCCAA CACCCGCTGA CGCGCCCTGA CGGGCTTGTC TGCTCCCGGC ATCCGCTTAC 4921 AGACAAGCTG TGACCGTCTC CGGGAGCTGC ATGTGTCAGA GGTTTTCACC GTCATCACCG 4981 AAACGCGCGA GACGAAAGGG CCTCGTGATA CGCCTATTTT TATAGGTTAA TGTCATGATA 5041 ATAATGGTTT CTTAGACGTC AGGTGGCACT TTTCGGGGAA ATGTGCGCGG AACCCCTATT 5101 TGTTTATTTT TCTAAATACA TTCAAATATG TATCCGCTCA TGAGACAATA ACCCTGATAA 5161 ATGCTTCAAT AATATTGAAA AAGGAAGAGT ATGAGTATTC AACATTTCCG TGTCGCCCTT 5221 ATTCCCTTTT TTGCGGCATT TTGCCTTCCT GTTTTTGCTC ACCCAGAAAC GCTGGTGAAA 5281 GTAAAAGATG CTGAAGATCA GTTGGGTGCA CGAGTGGGTT ACATCGAACT GGATCTCAAC 5341 AGCGGTAAGA TCCTTGAGAG TTTTCGCCCC GAAGAACGTT TTCCAATGAT GAGCACTTTT 5401 AAAGTTCTGC TATGTGGCGC GGTATTATCC CGTATTGACG CCGGGCAAGA GCAACTCGGT 5461 CGCCGCATAC ACTATTCTCA GAATGACTTG GTTGAGTACT CACCAGTCAC AGAAAAGCAT 5521 CTTACGGATG GCATGACAGT AAGAGAATTA TGCAGTGCTG CCATAACCAT GAGTGATAAC 5581 ACTGCGGCCA ACTTACTTCT GACAACGATC GGAGGACCGA AGGAGCTAAC CGCTTTTTTG 5641 CACAACATGG GGGATCATGT AACTCGCCTT GATCGTTGGG AACCGGAGCT GAATGAAGCC 5701 ATACCAAACG ACGAGCGTGA CACCACGATG CCTGTAGCAA TGGCAACAAC GTTGCGCAAA 5761 CTATTAACTG GCGAACTACT TACTCTAGCT TCCCGGCAAC AATTAATAGA CTGGATGGAG 5821 GCGGATAAAG TTGCAGGACC ACTTCTGCGC TCGGCCCTTC CGGCTGGCTG GTTTATTGCT 5881 GATAAATCTG GAGCCGGTGA GCGTGGGTCT CGCGGTATCA TTGCAGCACT GGGGCCAGAT 5941 GGTAAGCCCT CCCGTATCGT AGTTATCTAC ACGACGGGGA GTCAGGCAAC TATGGATGAA 6001 CGAAATAGAC AGATCGCTGA GATAGGTGCC TCACTGATTA AGCATTGGTA ACTGTCAGAC 6061 CAAGTTTACT CATATATACT TTAGATTGAT TTAAAACTTC ATTTTTAATT TAAAAGGATC 6121 TAGGTGAAGA TCCTTTTTGA TAATCTCATG ACCAAAATCC CTTAACGTGA GTTTTCGTTC 6181 CACTGAGCGT CAGACCCCGT AGAAAAGATC AAAGGATCTT CTTGAGATCC TTTTTTTCTG 6241 CGCGTAATCT GCTGCTTGCA AACAAAAAAA CCACCGCTAC CAGCGGTGGT TTGTTTGCCG 6301 GATCAAGAGC TACCAACTCT TTTTCCGAAG GTAACTGGCT TCAGCAGAGC GCAGATACCA 6361 AATACTGTCC TTCTAGTGTA GCCGTAGTTA GGCCACCACT TCAAGAACTC TGTAGCACCG 6421 CCTACATACC TCGCTCTGCT AATCCTGTTA CCAGTGGCTG CTGCCAGTGG CGATAAGTCG 6481 TGTCTTACCG GGTTGGACTC AAGACGATAG TTACCGGATA AGGCGCAGCG GTCGGGCTGA 6541 ACGGGGGGTT CGTGCACACA GCCCAGCTTG GAGCGAACGA CCTACACCGA ACTGAGATAC 6601 CTACAGCGTG AGCTATGAGA AAGCGCCACG CTTCCCGAAG GGAGAAAGGC GGACAGGTAT 6661 CCGGTAAGCG GCAGGGTCGG AACAGGAGAG CGCACGAGGG AGCTTCCAGG GGGAAACGCC 6721 TGGTATCTTT ATAGTCCTGT CGGGTTTCGC CACCTCTGAC TTGAGCGTCG ATTTTTGTGA 6781 TGCTCGTCAG GGGGGCGGAG CCTATGGAAA AACGCCAGCA ACGCGGCCTT TTTACGGTTC 6841 CTGGCCTTTT GCTGGCCTTT TGCTCACATG TTCTTTCCTG CGTTATCCCC TGATTCTGTG 6901 GATAACCGTA TTACCGCCTT TGAGTGAGCT GATACCGCTC GCCGCAGCCG AACGACCGAG 6961 CGCAGCGAGT CAGTGAGCGA GGAAGCGGAA GAGCGCCCAA TACGCAAACC GCCTC //