LOCUS YA1529_pAAV_hSyn 7151 bp ds-DNA circular 30-OCT-2018 COMMENT COMMENT COMMENT ApEinfo:methylated:1 FEATURES Location/Qualifiers promoter 151..635 /label=hSyn promoter /ApEinfo_fwdcolor="pink" /ApEinfo_revcolor="pink" /ApEinfo_graphicformat="arrow_data {{0 1 2 0 0 -1} {} 0} width 5 offset 0" CDS 1476..2186 /label=Citrine /ApEinfo_fwdcolor="pink" /ApEinfo_revcolor="pink" /ApEinfo_graphicformat="arrow_data {{0 1 2 0 0 -1} {} 0} width 5 offset 0" misc_feature 4414..4554 /label=R-ITR /ApEinfo_fwdcolor="pink" /ApEinfo_revcolor="pink" /ApEinfo_graphicformat="arrow_data {{0 1 2 0 0 -1} {} 0} width 5 offset 0" CDS 2385..2405 /label=ER2 /ApEinfo_fwdcolor="pink" /ApEinfo_revcolor="pink" /ApEinfo_graphicformat="arrow_data {{0 1 2 0 0 -1} {} 0} width 5 offset 0" misc_feature 1..130 /label=L-ITR /ApEinfo_fwdcolor="pink" /ApEinfo_revcolor="pink" /ApEinfo_graphicformat="arrow_data {{0 1 2 0 0 -1} {} 0} width 5 offset 0" CDS 2472..3430 /label=CheRiff /ApEinfo_fwdcolor="pink" /ApEinfo_revcolor="pink" /ApEinfo_graphicformat="arrow_data {{0 1 2 0 0 -1} {} 0} width 5 offset 0" misc_feature 3544..4131 /label=WPRE /ApEinfo_fwdcolor="pink" /ApEinfo_revcolor="pink" /ApEinfo_graphicformat="arrow_data {{0 1 2 0 0 -1} {} 0} width 5 offset 0" CDS 3426..3487 /label=TS /ApEinfo_fwdcolor="pink" /ApEinfo_revcolor="pink" /ApEinfo_graphicformat="arrow_data {{0 1 2 0 0 -1} {} 0} width 5 offset 0" polyA_signal 4154..4385 /label=bGH-Short polyA /ApEinfo_fwdcolor="pink" /ApEinfo_revcolor="pink" /ApEinfo_graphicformat="arrow_data {{0 1 2 0 0 -1} {} 0} width 5 offset 0" CDS join(648..1031,1035..1158,1160..1415) /label=QuasAr2 /ApEinfo_fwdcolor="pink" /ApEinfo_revcolor="pink" /ApEinfo_graphicformat="arrow_data {{0 1 2 0 0 -1} {} 0} width 5 offset 0" rep_origin 4646..4952 /label=F1 Origin /ApEinfo_fwdcolor="pink" /ApEinfo_revcolor="pink" /ApEinfo_graphicformat="arrow_data {{0 1 2 0 0 -1} {} 0} width 5 offset 0" CDS 2406..2471 /label=P2A /ApEinfo_fwdcolor="cyan" /ApEinfo_revcolor="green" /ApEinfo_graphicformat="arrow_data {{0 1 2 0 0 -1} {} 0} width 5 offset 0" misc_feature 5471..7151 /label=AmpR /ApEinfo_fwdcolor="pink" /ApEinfo_revcolor="pink" /ApEinfo_graphicformat="arrow_data {{0 1 2 0 0 -1} {} 0} width 5 offset 0" CDS 3488..3514 /label=HA /ApEinfo_fwdcolor="pink" /ApEinfo_revcolor="pink" /ApEinfo_graphicformat="arrow_data {{0 1 2 0 0 -1} {} 0} width 5 offset 0" CDS 1416..1475 /label=TS(1) /ApEinfo_label="TS" /ApEinfo_fwdcolor="pink" /ApEinfo_revcolor="pink" /ApEinfo_graphicformat="arrow_data {{0 1 2 0 0 -1} {} 0} width 5 offset 0" CDS 2187..2384 /label=TSx3 /ApEinfo_fwdcolor="pink" /ApEinfo_revcolor="pink" /ApEinfo_graphicformat="arrow_data {{0 1 2 0 0 -1} {} 0} width 5 offset 0" ORIGIN 1 cctgcaggca gctgcgcgct cgctcgctca ctgaggccgc ccgggcgtcg ggcgaccttt 61 ggtcgcccgg cctcagtgag cgagcgagcg cgcagagagg gagtggccaa ctccatcact 121 aggggttcct gcggccgcac gcgttgtaca gtgtctagac tgcagagggc cctgcgtatg 181 agtgcaagtg ggttttagga ccaggatgag gcggggtggg ggtgcctacc tgacgaccga 241 ccccgaccca ctggacaagc acccaacccc cattccccaa attgcgcatc ccctatcaga 301 gagggggagg ggaaacagga tgcggcgagg cgcgtgcgca ctgccagctt cagcaccgcg 361 gacagtgcct tcgcccccgc ctggcggcgc gcgccaccgc cgcctcagca ctgaaggcgc 421 gctgacgtca ctcgccggtc ccccgcaaac tccccttccc ggccaccttg gtcgcgtccg 481 cgccgccgcc ggcccagccg gaccgcacca cgcgaggcgc gagatagggg ggcacgggcg 541 cgaccatctg cgctgcggcg ccggcgactc agcgctgcct cagtctgcgg tgggcagcgg 601 aggagtcgtg tcgtgcctga gagcgcagtc gagaaggatc cgccaccatg gtaagtatcg 661 ctctgcaggc tggttacgac ctactgggtg acggcagacc tgaaaccctg tggctgggca 721 tcggcactct gctgatgctg attggaacct tctactttct ggtccgcgga tggggagtca 781 ccgataagga tgcccgggaa tattacgctg tgactatcct ggtgtccgga atcgcatccg 841 ccgcatatct gtctatgttc tttggtatcg ggcttactga ggtgtccgtc gggggcgaaa 901 tgttggatat ctattatgcc aggtacgccc agtggctgtt taccacccca cttctgctgc 961 tgcacctggc ccttctcgct aaggtggatc gggtgaccat cggcaccctg gtgggtgtgg 1021 acgccctgat gatcgtcact ggcctcatcg gagccttgag ccacacggcc atagccagat 1081 acagttggtg gttgttctct acaatttgca tgatagtggt gctctatgtt ctggctacat 1141 ccctgcgatc tgctgcaagg gagcggggcc ccgaggtggc atctaccttt aacaccctga 1201 cagctctggt cttggtgctg tggaccgctt accctatcct gtggatcata ggcactgagg 1261 gcgctggcgt ggtgggcctg ggcatcgaaa ctctgctgtt tatggtgttg gacgtgactg 1321 ccaaggtcgg ctttggcttt atcctgttga gatcccgggc tattctgggc gacaccgagg 1381 caccagaacc cagtgccggt gccgatacgt tgatgaagag tagaatcaca agcgaaggcg 1441 agtacatccc cctggatcaa atagacataa atgtagtgag caagggcgag gagctgttca 1501 ccggggtggt gcccatcctg gtcgagctgg acggcgacgt aaacggccac aagttcagcg 1561 tgtccggcga gggcgagggc gatgccacct acggcaagct gaccctgaag ttcatctgca 1621 ccaccggcaa gctgcccgtg ccctggccca ccctcgtgac caccttcggc tacggcctga 1681 tgtgcttcgc ccgctacccc gaccacatga agcagcacga cttcttcaag tccgccatgc 1741 ccgaaggcta cgtccaggag cgcaccatct tcttcaagga cgacggcaac tacaagaccc 1801 gcgccgaggt gaagttcgag ggcgacaccc tggtgaaccg catcgagctg aagggcatcg 1861 acttcaagga ggacggcaac atcctggggc acaagctgga gtacaactac aacagccaca 1921 acgtctatat catggccgac aagcagaaga acggcatcaa ggtgaacttc aagatccgcc 1981 acaacatcga ggacggcagc gtgcagctcg ccgaccacta ccagcagaac acccccatcg 2041 gcgacggccc cgtgctgctg cccgacaacc actacctgag ctaccagtcc gccctgagca 2101 aagaccccaa cgagaagcgc gatcacatgg tcctgctgga gttcgtgacc gccgccggga 2161 tcactctcgg catggacgag ctgtacaaat caaggatcac ctctgagggc gagtatatcc 2221 ctctggatca gatcgacatt aacgtcggtg gaaaatcccg cataacctct gagggcgagt 2281 acatccctct ggatcaaatc gatataaacg tggggggaaa aagtcgaatc acttctgagg 2341 gcgagtatat acccctcgat cagattgaca tcaatgtggg gggcttttgt tatgagaatg 2401 aagtgggctc cggagccacg aacttctctc tgttaaagca agcaggagac gtggaagaaa 2461 accccggtcc cggcggagct cctgctccag acgctcacag cgccccacct ggaaacgatt 2521 ctgccggagg cagtgagtac catgccccag ctggatatca agtgaatcca ccctaccacc 2581 ccgtgcatgg gtatgaggaa cagtgcagct ccatctacat ctactatggg gccctgtggg 2641 agcaggaaac agctaggggc ttccagtggt ttgccgtgtt cctgtctgcc ctgtttctgg 2701 ctttctacgg ctggcacgcc tataaggcca gcgtgggatg ggaggaagtg tacgtgtgct 2761 ccgtggagct gatcaaagtg attctggaga tctatttcga gttcaccagt cctgctatgc 2821 tgttcctgta cggagggaac attaccccat ggctgagata tgccgaatgg ctgctgacat 2881 gtcccgtgat cctgattcat ctgtctaaca tcaccggcct gagtgaggca tacaataagc 2941 ggacaatggc tctgctggtg tccgacctgg gaactatttg catgggagtg acagccgctc 3001 tggccactgg gtgggtgaag tggctgtttt actgtatcgg cctggtgtat ggaacccaga 3061 cattctacaa cgctggaatc atctacgtgg agtcttacta tatcatgcct gccggcggct 3121 gtaagaaact ggtgctggcc atgactgccg tgtactattc tagttggctg atgtttcccg 3181 gcctgttcat ctttgggcct gaaggcatgc acaccctgag cgtggctggg tccactattg 3241 gccataccat cgccgacctg ctgtccaaga atatttgggg actgctgggg cacttcctgc 3301 ggatcaaaat tcacgagcat atcattatgt acggcgatat caggagacca gtgagctccc 3361 agtttctggg acgcaaggtg gacgtgctgg ccttcgtgac agaggaagat aaagtggcgg 3421 ccgccaagag caggatcacc agcgagggcg agtacatccc cctggaccag atcgacatca 3481 acgtGGGtac ccatacgatg ttccagatta cgcttaagaa ttcgatatca agcttatcga 3541 taatcaacct ctggattaca aaatttgtga aagattgact ggtattctta actatgttgc 3601 tccttttacg ctatgtggat acgctgcttt aatgcctttg tatcatgcta ttgcttcccg 3661 tatggctttc attttctcct ccttgtataa atcctggttg ctgtctcttt atgaggagtt 3721 gtggcccgtt gtcaggcaac gtggcgtggt gtgcactgtg tttgctgacg caacccccac 3781 tggttggggc attgccacca cctgtcagct cctttccggg actttcgctt tccccctccc 3841 tattgccacg gcggaactca tcgccgcctg ccttgcccgc tgctggacag gggctcggct 3901 gttgggcact gacaattccg tggtgttgtc ggggaaatca tcgtcctttc cttggctgct 3961 cgcctatgtt gccacctgga ttctgcgcgg gacgtccttc tgctacgtcc cttcggccct 4021 caatccagcg gaccttcctt cccgcggcct gctgccggct ctgcggcctc ttccgcgtct 4081 tcgccttcgc cctcagacga gtcggatctc cctttgggcc gcctccccgc atcgataccg 4141 agcgctgctc gagctagagc tcgctgatca gcctcgactg tgccttctag ttgccagcca 4201 tctgttgttt gcccctcccc cgtgccttcc ttgaccctgg aaggtgccac tcccactgtc 4261 ctttcctaat aaaatgagga aattgcatcg cattgtctga gtaggtgtca ttctattctg 4321 gggggtgggg tggggcagga cagcaagggg gaggattggg aagacaatag caggcatgct 4381 ggggaggtaa ccacgtgcgg accgagcggc cgcaggaacc cctagtgatg gagttggcca 4441 ctccctctct gcgcgctcgc tcgctcactg aggccgggcg accaaaggtc gcccgacgcc 4501 cgggctttgc ccgggcggcc tcagtgagcg agcgagcgcg cagctgcctg caggggcgcc 4561 tgatgcggta ttttctcctt acgcatctgt gcggtatttc acaccgcata cgtcaaagca 4621 accatagtac gcgccctgta gcggcgcatt aagcgcggcg ggtgtggtgg ttacgcgcag 4681 cgtgaccgct acacttgcca gcgccctagc gcccgctcct ttcgctttct tcccttcctt 4741 tctcgccacg ttcgccggct ttccccgtca agctctaaat cgggggctcc ctttagggtt 4801 ccgatttagt gctttacggc acctcgaccc caaaaaactt gatttgggtg atggttcacg 4861 tagtgggcca tcgccctgat agacggtttt tcgccctttg acgttggagt ccacgttctt 4921 taatagtgga ctcttgttcc aaactggaac aacactcaat cctatctcgg gctattcttt 4981 tgatttataa gggattttgc cgatttcggt ctattggtta aaaaatgagc tgatttaaca 5041 aaaatttaac gcgaatttta acaaaatatt aacgtttaca attttatggt gcactctcag 5101 tacaatctgc tctgatgccg catagttaag ccagccccga cacccgccaa cacccgctga 5161 cgcgccctga cgggcttgtc tgctcccggc atccgcttac agacaagctg tgaccgtctc 5221 cgggagctgc atgtgtcaga ggttttcacc gtcatcaccg aaacgcgcga gacgaaaggg 5281 cctcgtgata cgcctatttt tataggttaa tgtcatgata ataatggttt cttagacgtc 5341 aggtggcact tttcggggaa atgtgcgcgg aacccctatt tgtttatttt tctaaataca 5401 ttcaaatatg tatccgctca tgagacaata accctgataa atgcttcaat aatattgaaa 5461 aaggaagagt atgagtattc aacatttccg tgtcgccctt attccctttt ttgcggcatt 5521 ttgccttcct gtttttgctc acccagaaac gctggtgaaa gtaaaagatg ctgaagatca 5581 gttgggtgca cgagtgggtt acatcgaact ggatctcaac agcggtaaga tccttgagag 5641 ttttcgcccc gaagaacgtt ttccaatgat gagcactttt aaagttctgc tatgtggcgc 5701 ggtattatcc cgtattgacg ccgggcaaga gcaactcggt cgccgcatac actattctca 5761 gaatgacttg gttgagtact caccagtcac agaaaagcat cttacggatg gcatgacagt 5821 aagagaatta tgcagtgctg ccataaccat gagtgataac actgcggcca acttacttct 5881 gacaacgatc ggaggaccga aggagctaac cgcttttttg cacaacatgg gggatcatgt 5941 aactcgcctt gatcgttggg aaccggagct gaatgaagcc ataccaaacg acgagcgtga 6001 caccacgatg cctgtagcaa tggcaacaac gttgcgcaaa ctattaactg gcgaactact 6061 tactctagct tcccggcaac aattaataga ctggatggag gcggataaag ttgcaggacc 6121 acttctgcgc tcggcccttc cggctggctg gtttattgct gataaatctg gagccggtga 6181 gcgtggaagc cgcggtatca ttgcagcact ggggccagat ggtaagccct cccgtatcgt 6241 agttatctac acgacgggga gtcaggcaac tatggatgaa cgaaatagac agatcgctga 6301 gataggtgcc tcactgatta agcattggta actgtcagac caagtttact catatatact 6361 ttagattgat ttaaaacttc atttttaatt taaaaggatc taggtgaaga tcctttttga 6421 taatctcatg accaaaatcc cttaacgtga gttttcgttc cactgagcgt cagaccccgt 6481 agaaaagatc aaaggatctt cttgagatcc tttttttctg cgcgtaatct gctgcttgca 6541 aacaaaaaaa ccaccgctac cagcggtggt ttgtttgccg gatcaagagc taccaactct 6601 ttttccgaag gtaactggct tcagcagagc gcagatacca aatactgttc ttctagtgta 6661 gccgtagtta ggccaccact tcaagaactc tgtagcaccg cctacatacc tcgctctgct 6721 aatcctgtta ccagtggctg ctgccagtgg cgataagtcg tgtcttaccg ggttggactc 6781 aagacgatag ttaccggata aggcgcagcg gtcgggctga acggggggtt cgtgcacaca 6841 gcccagcttg gagcgaacga cctacaccga actgagatac ctacagcgtg agctatgaga 6901 aagcgccacg cttcccgaag ggagaaaggc ggacaggtat ccggtaagcg gcagggtcgg 6961 aacaggagag cgcacgaggg agcttccagg gggaaacgcc tggtatcttt atagtcctgt 7021 cgggtttcgc cacctctgac ttgagcgtcg atttttgtga tgctcgtcag gggggcggag 7081 cctatggaaa aacgccagca acgcggcctt tttacggttc ctggcctttt gctggccttt 7141 tgctcacatg t //