LOCUS       114403_AICSDP-2:        2756 bp    DNA     linear   UNA 19-DEC-2018
DEFINITION  N-Term w/Start codon, missing Stop.
ACCESSION   urn.local.amandah.5v-9vz5uer
VERSION     urn.local.amandah.5v-9vz5uer
KEYWORDS    .
SOURCE      
  ORGANISM  
            .
FEATURES             Location/Qualifiers
     ncRNA           complement(<1..535)
                     /ncRNA_class="lncRNA"
                     /gene="LOC102723557"
                     /product="uncharacterized LOC102723557, transcript
                     variantX2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Gnomon. Supporting evidence
                     includes similarity to: 100% coverage of the annotated
                     genomic feature by RNAseq alignments, including 2 samples
                     with support for all annotated introns"
                     /transcript_id="XR_948741.1"
                     /db_xref="GI:767937363"
                     /db_xref="GeneID:102723557"
                     /label="LOC102723557 ncRNA"
     source          <1..>1000
                     /organism="Homo sapiens"
                     /mol_type="genomic DNA"
                     /db_xref="taxon:9606"
                     /chromosome=5
                     /label="source Homo sapiens"
     gene            complement(<1..535)
                     /gene="LOC102723557"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Gnomon."
                     /db_xref="GeneID:102723557"
                     /label="LOC102723557 gene"
     gene            112..>1000
                     /gene="LMNB1"
                     /gene_synonym="ADLD; LMN; LMN2; LMNB"
                     /note="lamin B1; Derived by automated computational
                     analysis using gene prediction method: BestRefSeq,Gnomon."
                     /db_xref="GeneID:4001"
                     /db_xref="HGNC:HGNC:6637"
                     /db_xref="HPRD:01036"
                     /db_xref="MIM:150340"
                     /label="LMNB1 gene"
     mRNA            112..>1000
                     /gene="LMNB1"
                     /gene_synonym="ADLD; LMN; LMN2; LMNB"
                     /product="lamin B1, transcript variant 1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: BestRefSeq."
                     /transcript_id="NM_005573.3"
                     /db_xref="GI:310688956"
                     /db_xref="GeneID:4001"
                     /db_xref="HGNC:HGNC:6637"
                     /db_xref="HPRD:01036"
                     /db_xref="MIM:150340"
                     /label="LMNB1 mRNA"
     misc_RNA        634..>1000
                     /gene="LMNB1"
                     /gene_synonym="ADLD; LMN; LMN2; LMNB"
                     /product="lamin B1, transcript variant X1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Gnomon. Supporting evidence
                     includes similarity to: 1 mRNA, 109 ESTs, and 100%
                     coverage of the annotated genomic feature by RNAseq
                     alignments, including 15 samples with support for all
                     annotated introns"
                     /transcript_id="XR_948250.1"
                     /db_xref="GI:767935875"
                     /db_xref="GeneID:4001"
                     /db_xref="HGNC:HGNC:6637"
                     /db_xref="HPRD:01036"
                     /db_xref="MIM:150340"
                     /label="LMNB1 RNA"
     mRNA            642..733
                     /gene="LMNB1"
                     /gene_synonym="ADLD; LMN; LMN2; LMNB"
                     /product="lamin B1, transcript variant 2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: BestRefSeq."
                     /transcript_id="NM_001198557.1"
                     /db_xref="GI:310689048"
                     /db_xref="GeneID:4001"
                     /db_xref="HGNC:HGNC:6637"
                     /db_xref="HPRD:01036"
                     /db_xref="MIM:150340"
                     /label="LMNB1 mRNA"
     misc_RNA        complement(992..>1000)
                     /created_by="User"
                     /modified_by="User"
                     /label="crRNA1 Binding Site"
     misc_RNA        complement(995..>1000)
                     /created_by="User"
                     /modified_by="User"
                     /label="crRNA2 Binding Site"
     CDS             998..>1000
                     /gene="LMNB1"
                     /gene_synonym="ADLD; LMN; LMN2; LMNB"
                     /note="isoform 1 is encoded by transcript variant 1;
                     Derived by automated computational analysis using gene
                     prediction method: BestRefSeq."
                     /codon_start=1
                     /product="lamin-B1 isoform 1"
                     /protein_id="NP_005564.1"
                     /db_xref="GI:5031877"
                     /db_xref="CCDS:CCDS4140.1"
                     /db_xref="GeneID:4001"
                     /db_xref="HGNC:HGNC:6637"
                     /db_xref="HPRD:01036"
                     /db_xref="MIM:150340"
                     /translation="MATATPVPPRMGSRAGGPTTPLSPTRLSRLQEKEELRELNDRLA
                     VYIDKVRSLETENSALQLQVTEREEVRGRELTGLKALYETELADARRALDDTARERAK
                     LQIELGKCKAEHDQLLLNYAKKESDLNGAQIKLREYEAALNSKDAALATALGDKKSLE
                     GDLEDLKDQIAQLEASLAAAKKQLADETLLKVDLENRCQSLTEDLEFRKSMYEEEINE
                     TRRKHETRLVEVDSGRQIEYEYKLAQALHEMREQHDAQVRLYKEELEQTYHAKLENAR
                     LSSEMNTSTVNSAREELMESRMRIESLSSQLSNLQKESRACLERIQELEDLLAKEKDN
                     SRRMLTDKEREMAEIRDQMQQQLNDYEQLLDVKLALDMEISAYRKLLEGEEERLKLSP
                     SPSSRVTVSRASSSRSVRTTRGKRKRVDVEESEASSSVSISHSASATGNVCIEEIDVD
                     GKFIRLKNTSEQDQPMGGWEMIRKIGDTSVSYKYTSRYVLKAGQTVTIWAANAGVTAS
                     PPTDLIWKNQNSWGTGEDVKVILKNSQGEEVAQRSTVFKTTIPEEEEEEEEAAGVVVE
                     EELFHQQGTPRASNRSCAIM"
                     /label="LMNB1 CDS"
     ORF             1001..1729
                     /created_by="User"
                     /modified_by="User"
                     /label="mTagRFP-T"
     misc_feature    1730..1759
                     /created_by="User"
                     /label="SGLRSRAQAS Linker"
     CDS             <1760..2115
                     /gene="LMNB1"
                     /gene_synonym="ADLD; LMN; LMN2; LMNB"
                     /note="isoform 1 is encoded by transcript variant 1;
                     Derived by automated computational analysis using gene
                     prediction method: BestRefSeq."
                     /codon_start=1
                     /product="lamin-B1 isoform 1"
                     /protein_id="NP_005564.1"
                     /db_xref="GI:5031877"
                     /db_xref="CCDS:CCDS4140.1"
                     /db_xref="GeneID:4001"
                     /db_xref="HGNC:HGNC:6637"
                     /db_xref="HPRD:01036"
                     /db_xref="MIM:150340"
                     /translation="MATATPVPPRMGSRAGGPTTPLSPTRLSRLQEKEELRELNDRLA
                     VYIDKVRSLETENSALQLQVTEREEVRGRELTGLKALYETELADARRALDDTARERAK
                     LQIELGKCKAEHDQLLLNYAKKESDLNGAQIKLREYEAALNSKDAALATALGDKKSLE
                     GDLEDLKDQIAQLEASLAAAKKQLADETLLKVDLENRCQSLTEDLEFRKSMYEEEINE
                     TRRKHETRLVEVDSGRQIEYEYKLAQALHEMREQHDAQVRLYKEELEQTYHAKLENAR
                     LSSEMNTSTVNSAREELMESRMRIESLSSQLSNLQKESRACLERIQELEDLLAKEKDN
                     SRRMLTDKEREMAEIRDQMQQQLNDYEQLLDVKLALDMEISAYRKLLEGEEERLKLSP
                     SPSSRVTVSRASSSRSVRTTRGKRKRVDVEESEASSSVSISHSASATGNVCIEEIDVD
                     GKFIRLKNTSEQDQPMGGWEMIRKIGDTSVSYKYTSRYVLKAGQTVTIWAANAGVTAS
                     PPTDLIWKNQNSWGTGEDVKVILKNSQGEEVAQRSTVFKTTIPEEEEEEEEAAGVVVE
                     EELFHQQGTPRASNRSCAIM"
                     /label="LMNB1 CDS"
     source          <1760..>2756
                     /organism="Homo sapiens"
                     /mol_type="genomic DNA"
                     /db_xref="taxon:9606"
                     /chromosome=5
                     /label="source Homo sapiens"
     gene            <1760..>2756
                     /gene="LMNB1"
                     /gene_synonym="ADLD; LMN; LMN2; LMNB"
                     /note="lamin B1; Derived by automated computational
                     analysis using gene prediction method: BestRefSeq,Gnomon."
                     /db_xref="GeneID:4001"
                     /db_xref="HGNC:HGNC:6637"
                     /db_xref="HPRD:01036"
                     /db_xref="MIM:150340"
                     /label="LMNB1 gene"
     mRNA            <1760..2115
                     /gene="LMNB1"
                     /gene_synonym="ADLD; LMN; LMN2; LMNB"
                     /product="lamin B1, transcript variant 1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: BestRefSeq."
                     /transcript_id="NM_005573.3"
                     /db_xref="GI:310688956"
                     /db_xref="GeneID:4001"
                     /db_xref="HGNC:HGNC:6637"
                     /db_xref="HPRD:01036"
                     /db_xref="MIM:150340"
                     /label="LMNB1 mRNA"
     misc_RNA        <1760..2115
                     /gene="LMNB1"
                     /gene_synonym="ADLD; LMN; LMN2; LMNB"
                     /product="lamin B1, transcript variant X1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Gnomon. Supporting evidence
                     includes similarity to: 1 mRNA, 109 ESTs, and 100%
                     coverage of the annotated genomic feature by RNAseq
                     alignments, including 15 samples with support for all
                     annotated introns"
                     /transcript_id="XR_948250.1"
                     /db_xref="GI:767935875"
                     /db_xref="GeneID:4001"
                     /db_xref="HGNC:HGNC:6637"
                     /db_xref="HPRD:01036"
                     /db_xref="MIM:150340"
                     /label="LMNB1 RNA"
     misc_RNA        complement(<1760..1773)
                     /created_by="User"
                     /modified_by="User"
                     /label="crRNA2 Binding Site"
     misc_RNA        complement(<1760..1770)
                     /created_by="User"
                     /modified_by="User"
                     /label="crRNA1 Binding Site"
ORIGIN      
        1 aaggctggta cttggaacct gcaagccgtg catttggaac ctcggactca agtgcctatt
       61 acgtaattcc acagcgtccc ggcctccagg ccgtttcccg agccctccag cggagcgggg
      121 gataaggtta ccacgcccgc ggtggccggg gacactctga gtttcgcgtg tggcttttag
      181 ggacgtttat atttgaattt ccctgaaccg ccgagtgtgg gcggtggcgc agatccgtcc
      241 cggaaacctc cgggctcctt cccgcctttc tcaggcccgg cccctccaag gggtccccgc
      301 ggggcggcgg gagggccctg ggcccagagc cgcgcgggtg ggcagtccca ggcgtccttc
      361 cttacagccc tgagcctggt ccgggaaccg cccagccggg agggccgagc tgacggttgc
      421 ccaagggcca gattttaaat ttacaggccc ggcccccgaa ccgccgaagc gcgctgcctg
      481 ctccccattg gcccatggta gtcacgtgga ggcgccgggg cgtgccggcc atgttgggga
      541 gtgcggcgcc gcggcccgcg ccacctccgc cccccgcggc ttgcctccag cccgcccctc
      601 ccggccctcc tccccccgcc cgccgctccg tgcagcctga gaggaaacaa agtgctgcga
      661 gcaggagacg gcggcggcgc gaaccctgct gggcctccag tcaccctcgt cttgcatttt
      721 cccgcgtgcg tgtgtgagtg ggtgtgtgtg ttttcttaca aagggtattt cgcgatcgat
      781 cgattgattc gtagttcccc cccgcgcgcc tttgcccttt gtgctgtaat cgagctcccg
      841 ccatcccagg tgcttctccg ttcctctaaa cgccagcgtc tggacgtgag cgcaggtcgc
      901 cggtttgtgc cttcggtccc cgcttcgccc cctgccgtcc cctccttatc acggtcccgc
      961 tcgcggcctc gccgccccgc tgtctccgcc gcccgccatg gtgtctaagg gcgaagagct
     1021 gattaaggag aacatgcaca tgaagctgta catggagggc accgtgaaca accaccactt
     1081 caagtgcaca tccgagggcg aaggcaagcc ctacgagggc acccagacca tgagaatcaa
     1141 ggtggtcgag ggcggccctc tccccttcgc cttcgacatc ctggctacca gcttcatgta
     1201 cggcagcaga accttcatca accacaccca gggcatcccc gatttcttta agcagtcctt
     1261 ccctgagggc ttcacatggg agagagtcac cacatacgaa gacgggggcg tgctgaccgc
     1321 tacccaggac accagcctcc aggacggctg cctcatctac aacgtcaaga tcagaggggt
     1381 gaacttccca tccaacggcc ctgtgatgca gaagaaaaca ctcggctggg aggccaacac
     1441 cgagatgctg taccccgctg acggcggcct ggaaggcaga accgacatgg ccctgaagct
     1501 cgtgggcggg ggccacctga tctgcaactt caagaccaca tacagatcca agaaacccgc
     1561 taagaacctc aagatgcccg gcgtctacta tgtggaccac agactggaaa gaatcaagga
     1621 ggccgacaaa gagacctacg tcgagcagca cgaggtggct gtggccagat actgcgacct
     1681 ccctagcaaa ctggggcaca aacttaatgg catggacgag ctgtacaaga gcggcctgag
     1741 aagcagagcc caggccagcg cgactgcgac ccccgtgccg ccgcggatgg gcagccgcgc
     1801 tggcggcccc accacgccgc tgagccccac gcgcctgtcg cggctccagg agaaggagga
     1861 gctgcgcgag ctcaatgacc ggctggcggt gtacatcgac aaggtgcgca gcctggagac
     1921 ggagaacagc gcgctgcagc tgcaggtgac ggagcgcgag gaggtgcgcg gccgtgagct
     1981 caccggcctc aaggcgctct acgagaccga gctggccgac gcgcgacgcg cgctcgacga
     2041 cacggcccgc gagcgcgcca agctgcagat cgagctgggc aagtgcaagg cggaacacga
     2101 ccagctgctc ctcaagtgag tgctagctgg cggccgcgtt agcgccaagg aggggcgggg
     2161 gcgcaaccgc ggcgaccagc tcaccgggtt ctgccgtggg gagggagcag aggccaggat
     2221 gcacgcgtcc ttctgaagga acagggtctc ggtctccgga aaggagaaag aatctagagt
     2281 tcatagcgga gcaggggtcg cggagggggc tcgagctgta gcgctggggg gccgtgatgc
     2341 ccatttctag attttggata cccgctggga cgtggtaagt gcgcgcctgg gactgccgag
     2401 aaggagctcc cgctttcgca ctcgaatccg gggagccggc gcggagaggc ggcccctcag
     2461 gccccaggtg cggggagctg gagcgcgagc gcgcgctcgc gtgcgcgccc cagtttccgg
     2521 ccggcgcgag acaaagcgtc tagcggattt gcagtgccgg gatgggcggc cggggaggac
     2581 tggcagcccg cctctagaat gaatgagctt cgcgcgggca gagagaggaa ggggagggac
     2641 cttcccgcag catccgcgtc tcctgggggt gggtcccgct ttggcgcgct cagtcttggc
     2701 cctgtgacgt tttgcgaaga ttctacgcct gctttaggcg ggagagagag gcggag
//
