LOCUS pEPYC1CB0177 7333 bp ds-DNA circular 27-MAY-2020 DEFINITION . FEATURES Location/Qualifiers misc_feature 4804..4870 /label="TMV omega" /ApEinfo_revcolor=#faac61 /ApEinfo_fwdcolor=#faac61 Misc._feature complement(28..155) /label="RB short" /ApEinfo_revcolor=#b1ff67 /ApEinfo_fwdcolor=#b1ff67 CDS 6528..6611 /label="C terminal 3xFLAG (FLAG octapeptide) tag" /ApEinfo_revcolor=#f8d3a9 /ApEinfo_fwdcolor=#f8d3a9 motif 4566..4578 /label="CRE_TCP2" /ApEinfo_revcolor=#f58a5e /ApEinfo_fwdcolor=#f58a5e CDS complement(2468..3325) /label="AmpR" /ApEinfo_revcolor=#f58a5e /ApEinfo_fwdcolor=#f58a5e misc_feature 4622..4634 /label="CRE_bHLH2" /ApEinfo_revcolor=#f58a5e /ApEinfo_fwdcolor=#f58a5e motif 4589..4617 /label="CRE_C2C2dof+2" /ApEinfo_revcolor=#f58a5e /ApEinfo_fwdcolor=#f58a5e rep_origin complement(1688..2370) /label="ColE1 origin" /ApEinfo_revcolor=#9eafd2 /ApEinfo_fwdcolor=#9eafd2 Origin complement(179..1660) /label="RK2" /ApEinfo_revcolor=#84b0dc /ApEinfo_fwdcolor=#84b0dc motif 4735..4756 /label="MMV_C-CRE" /ApEinfo_revcolor=#f58a5e /ApEinfo_fwdcolor=#f58a5e misc_feature 4391..4415 /label="CRE_CCAAT+" /ApEinfo_revcolor=#f58a5e /ApEinfo_fwdcolor=#f58a5e misc_feature 4685..4699 /label="CRE_TCP3" /ApEinfo_revcolor=#f58a5e /ApEinfo_fwdcolor=#f58a5e Misc._feature 4170..4317 /label="LB" /ApEinfo_revcolor=#84b0dc /ApEinfo_fwdcolor=#84b0dc misc_feature 4435..4458 /label="CRE_MADS+2" /ApEinfo_revcolor=#f58a5e /ApEinfo_fwdcolor=#f58a5e misc_feature 4453..4488 /label="CRE_WRKY+" /ApEinfo_revcolor=#f58a5e /ApEinfo_fwdcolor=#f58a5e misc_feature 4673..4685 /label="CRE_G2like" /ApEinfo_revcolor=#f58a5e /ApEinfo_fwdcolor=#f58a5e Terminator 6616..7329 /label="ocst" /ApEinfo_revcolor=#d59687 /ApEinfo_fwdcolor=#d59687 Origin 1671..2460 /label="pUC Ori" /ApEinfo_revcolor=#85dae9 /ApEinfo_fwdcolor=#85dae9 CDS 4872..6527 /label="LucF" /ApEinfo_revcolor=#f58a5e /ApEinfo_fwdcolor=#f58a5e origin complement(3523..4140) /label="OriV" /ApEinfo_revcolor=#b1ff67 /ApEinfo_fwdcolor=#b1ff67 misc_feature 4489..4516 /label="CRE_bHLH+" /ApEinfo_revcolor=#f58a5e /ApEinfo_fwdcolor=#f58a5e ORIGIN 1 GCAATTGTCT TCTGCACGAA GTGGTTTAAA CTATCAGTGT TTGACAGGAT ATATTGGCGG 61 GTAAACCTAA GAGAAAAGAG CGTTTATTAG AATAATCGGA TATTTAAAAG GGCGTGAAAA 121 GGTTTATCCG TTCGTCCATT TGTATGTGCA TGCCAACCAC AGGGTTCCCC AGATCAGGCG 181 CTGGCTGCTG AACCCCCAGC CGGAACTGAC CCCACAAGGC CCTAGCGTTT GCAATGCACC 241 AGGTCATCAT TGACCCAGGC GTGTTCCACC AGGCCGCTGC CTCGCAACTC TTCGCAGGCT 301 TCGCCGACCT GCTCGCGCCA CTTCTTCACG CGGGTGGAAT CCGATCCGCA CATGAGGCGG 361 AAGGTTTCCA GCTTGAGCGG GTACGGCTCC CGGTGCGAGC TGAAATAGTC GAACATCCGT 421 CGGGCCGTCG GCGACAGCTT GCGGTACTTC TCCCATATGA ATTTCGTGTA GTGGTCGCCA 481 GCAAACAGCA CGACGATTTC CTCGTCGATC AGGACCTGGC AACGGGACGT TTTCTTGCCA 541 CGGTCCAGGA CGCGGAAGCG GTGCAGCAGC GACACCGATT CCAGGTGCCC AACGCGGTCG 601 GACGTGAAGC CCATCGCCGT CGCCTGTAGG CGCGACAGGC ATTCCTCGGC CTTCGTGTAA 661 TACCGGCCAT TGATCGACCA GCCCAGGTCC TGGCAAAGCT CGTAGAACGT GAAGGTGATC 721 GGCTCGCCGA TAGGGGTGCG CTTCGCGTAC TCCAACACCT GCTGCCACAC CAGTTCGTCA 781 TCGTCGGCCC GCAGCTCGAC GCCGGTGTAG GTGATCTTCA CGTCCTTGTT GACGTGGAAA 841 ATGACCTTGT TTTGCAGCGC CTCGCGCGGG ATTTTCTTGT TGCGCGTGGT GAACAGGGCA 901 GAGCGGGCCG TGTCGTTTGG CATCGCTCGC ATCGTGTCCG GCCACGGCGC AATATCGAAC 961 AAGGAAAGCT GCATTTCCTT GATCTGCTGC TTCGTGTGTT TCAGCAACGC GGCCTGCTTG 1021 GCCTCGCTGA CCTGTTTTGC CAGGTCCTCG CCGGCGGTTT TTCGCTTCTT GGTCGTCATA 1081 GTTCCTCGCG TGTCGATGGT CATCGACTTC GCCAAACCTG CCGCCTCCTG TTCAAGACGA 1141 CGCGAACGCT CCACGGCGGC CGATGGCGCG GGCAGGGCAG GGGGAGCCAG TTGCACGCTG 1201 TCGCGCTCGA TCTTGGCCGT AGCTTGCTGG ACCATCGAGC CGACGGACTG GAAGGTTTCG 1261 CGGGGCGCAC GCATGACGGT GCGGCTTGCG ATGGTTTCGG CATCCTCGGC GGAAAACCCC 1321 GCGTCGATCA GTTCTTGCCT GTATGCCTTC CGGTCAAACG TCCGATTCAT TCACCCTCCT 1381 TGCGGGATTG CCCCGACTCA CGCCGGGGCA ATGTGCCCTT ATTCCTGATT TGACCCGCCT 1441 GGTGCCTTGG TGTCCAGATA ATCCACCTTA TCGGCAATGA AGTCGGTCCC GTAGACCGTC 1501 TGGCCGTCCT TCTCGTACTT GGTATTCCGA ATCTTGCCCT GCACGAATAC CAGCGACCCC 1561 TTGCCCAAAT ACTTGCCGTG GGCCTCGGCC TGAGAGCCAA AACACTTGAT GCGGAAGAAG 1621 TCGGTGCGCT CCTGCTTGTC GCCGGCATCG TTGCGCCACA TCTAGGATCT GCCAGGAACC 1681 GTAAAAAGGC CGCGTTGCTG GCGTTTTTCC ATAGGCTCCG CCCCCCTGAC GAGCATCACA 1741 AAAATCGACG CTCAAGTCAG AGGTGGCGAA ACCCGACAGG ACTATAAAGA TACCAGGCGT 1801 TTCCCCCTGG AAGCTCCCTC GTGCGCTCTC CTGTTCCGAC CCTGCCGCTT ACCGGATACC 1861 TGTCCGCCTT TCTCCCTTCG GGAAGCGTGG CGCTTTCTCA TAGCTCACGC TGTAGGTATC 1921 TCAGTTCGGT GTAGGTCGTT CGCTCCAAGC TGGGCTGTGT GCACGAACCC CCCGTTCAGC 1981 CCGACCGCTG CGCCTTATCC GGTAACTATC GTCTTGAGTC CAACCCGGTA AGACACGACT 2041 TATCGCCACT GGCAGCAGCC ACTGGTAACA GGATTAGCAG AGCGAGGTAT GTAGGCGGTG 2101 CTACAGAGTT CTTGAAGTGG TGGCCTAACT ACGGCTACAC TAGAAGAACA GTATTTGGTA 2161 TCTGCGCTCT GCTGAAGCCA GTTACCTTCG GAAAAAGAGT TGGTAGCTCT TGATCCGGCA 2221 AACAAACCAC CGCTGGTAGC GGTGGTTTTT TTGTTTGCAA GCAGCAGATT ACGCGCAGAA 2281 AAAAAGGATC TCAAGAAGAT CCTTTGATCT TTTCTACGGG GTCTGACGCT CAGTGGAACG 2341 AAAACTCACG TTAAGGGATT TTGGTCATGA GATTATCAAA AAGGATCTTC ACCTAGATCC 2401 TTTTAAATTA AAAATGAAGT TTTAAATCAA TCTAAAGTAT ATATGAGTAA ACTTGGTCTG 2461 ACAGTTACCA ATGCTTAATC AGTGAGGCAC CTATCTCAGC GATCTGTCTA TTTCGTTCAT 2521 CCATAGTTGC CTGACTCCCC GTCGTGTAGA TAACTACGAT ACGGGAGGGC TTACCATCTG 2581 GCCCCAGTGC TGCAATGATA CCGCGAGAAC CACGCTCACC GGCTCCAGAT TTATCAGCAA 2641 TAAACCAGCC AGCCGGAAGG GCCGAGCGCA GAAGTGGTCC TGCAACTTTA TCCGCCTCCA 2701 TCCAGTCTAT TAATTGTTGC CGGGAAGCTA GAGTAAGTAG TTCGCCAGTT AATAGTTTGC 2761 GCAACGTTGT TGCCATTGCT ACAGGCATCG TGGTGTCACG CTCGTCGTTT GGTATGGCTT 2821 CATTCAGCTC CGGTTCCCAA CGATCAAGGC GAGTTACATG ATCCCCCATG TTGTGCAAAA 2881 AAGCGGTTAG CTCCTTCGGT CCTCCGATCG TTGTCAGAAG TAAGTTGGCC GCAGTGTTAT 2941 CACTCATGGT TATGGCAGCA CTGCATAATT CTCTTACTGT CATGCCATCC GTAAGATGCT 3001 TTTCTGTGAC TGGTGAGTAC TCAACCAAGT CATTCTGAGA ATAGTGTATG CGGCGACCGA 3061 GTTGCTCTTG CCCGGCGTCA ATACGGGATA ATACCGCGCC ACATAGCAGA ACTTTAAAAG 3121 TGCTCATCAT TGGAAAACGT TCTTCGGGGC GAAAACTCTC AAGGATCTTA CCGCTGTTGA 3181 GATCCAGTTC GATGTAACCC ACTCGTGCAC CCAACTGATC TTCAGCATCT TTTACTTTCA 3241 CCAGCGTTTC TGGGTGAGCA AAAACAGGAA GGCAAAATGC CGCAAAAAAG GGAATAAGGG 3301 CGACACGGAA ATGTTGAATA CTCATACTCT TCCTTTTTCA ATATTATTGA AGCATTTATC 3361 AAGGTTATTG TCTCATGAGC GGATACATAT TTGAATGTAT TTAGAAAAAT AAACAAATAG 3421 GGGTTCCGCG CACGAATTGG CCAGCGCTGC CATTTTTGGG GTGAGGCCGT TCGCGGCCGA 3481 GGGGCGCAGC CCCTGGGGGG ATGGGAGGCC CGCGTTAGCG GGCCGGGAGG GTTCGAGAAG 3541 GGGGGGCACC CCCCTTCGGC GTGCGCGGTC ACGCGCACAG GGCGCAGCCC TGGTTAAAAA 3601 CAAGGTTTAT AAATATTGGT TTAAAAGCAG GTTAAAAGAC AGGTTAGCGG TGGCCGAAAA 3661 ACGGGCGGAA ACCCTTGCAA ATGCTGGATT TTCTGCCTGT GGACAGCCCC TCAAATGTCA 3721 ATAGGTGCGC CCCTCATCTG TCAGCACTCT GCCCCTCAAG TGTCAAGGAT CGCGCCCCTC 3781 ATCTGTCAGT AGTCGCGCCC CTCAAGTGTC AATACCGCAG GGCACTTATC CCCAGGCTTG 3841 TCCACATCAT CTGTGGGAAA CTCGCGTAAA ATCAGGCGTT TTCGCCGATT TGCGAGGCTG 3901 GCCAGCTCCA CGTCGCCGGC CGAAATCGAG CCTGCCCCTC ATCTGTCAAC GCCGCGCCGG 3961 GTGAGTCGGC CCCTCAAGTG TCAACGTCCG CCCCTCATCT GTCAGTGAGG GCCAAGTTTT 4021 CCGCGAGGTA TCCACAACGC CGGCGGCCGC GGTGTCTCGC ACACGGCTTC GACGGCGTTT 4081 CTGGCGCGTT TGCAGGGCCA TAGACGGCCG CCAGCCCAGC GGCGAGGGCA ACCAGCCCGG 4141 TGAGCGTCGC AAAGGAGATC CTGATCTGAC TGATGGGCTG CCTGTATCGA GTGGTGATTT 4201 TGTGCCGAGC TGCCGGTCGG GGAGCTGTTG GCTGGCTGGT GGCAGGATAT ATTGTGGTGT 4261 AAACAAATTG ACGCTTAGAC AACTTAATAA CACATTGCGG ACGTTTTTAA TGTACTGGGG 4321 TGGATGCAGT GGGCCCCACT CTGTGAAGAC AATGCCGAAT TCGGATCCGG AGTGGAAGAT 4381 TCAGAAAATC TCCATCAACA AATAATCCAA GTAAGGATTA ATGGATTGAT CAACATCCTT 4441 ACCGCTATGG GTAAGATTGA TGAAAAGTCA AAAACAAAAA TCAATTATGC ACACCAGCAT 4501 GTGTTGATCA CCAGCTATTG TGGGACACCA ATTTCGTCCA CAGACATCAA CATCTTATCG 4561 TCCTTGTGGG AGCCACCACT AAAACATTGC TTTGTCAAAA GCTAAAAAAG ATGATGCCCG 4621 ACAGCCACTT GTGTGAAGCA TGTGAAGCCG GTCCCTCCAC TAAGAAAATT AGTGAAGCAT 4681 CTTCCAGTGG TCCCTCCACT CACAGCTCAA TCAGTGAGCA ACAGGACGAA GGAAATGACG 4741 TAAGCCATGA CGTCTAATCC CACAAGAATT TCCTTATATA AGGAACACAA ATCAGAAGGT 4801 ACTGTATTTT TACAACAATT ACCAACAACA ACAAACAACA AACAACATTA CAATTACTAT 4861 TTACAATTAC AATGgaGgac gccaaaaaca taaagaaagg cccggcgcca ttctatccgc 4921 tggaagatgg aaccgctgga gagcaactgc ataaggctat gaagagatac gccctggttc 4981 ctggaacaat tgcttttaca gatgcacata tcgaggtgga catcacttac gctgagtact 5041 tcgaaatgtc cgttcggttg gcagaagcta tgaaacgata tgggctgaat acaaatcaca 5101 gaatcgtcgt atgcagtgaa aactctcttc aattctttat gccggtgttg ggcgcgttat 5161 ttatcggagt tgcagttgcg cccgcgaacg acatttataa tgaacgtgaa ttgctcaaca 5221 gtatgggcat ttcgcagcct accgtggtgt tcgtttccaa aaaggggttg caaaaaattt 5281 tgaacgtgca aaaaaagctc ccaatcatcc aaaaaattat tatcatggat tctaaaacgg 5341 attaccaggg atttcagtcg atgtacacgt tcgtcacatc tcatctacct cccggtttta 5401 atgaatacga ttttgtgcca gagtccttcg atagggacaa gacaattgca ctgatcatga 5461 actcctctgg atctactggt ctgcctaaag gtgtcgctct gcctcataga actgcctgcg 5521 tgagattctc gcatgccaga gatcctattt ttggcaatca aatcattccg gatactgcga 5581 ttttaagtgt tgttccattc catcacggtt ttggaatgtt tactacactc ggatatttga 5641 tatgtggatt tcgagtcgtc ttaatgtata gatttgaaga agaActgttt ctgaggagcc 5701 ttcaggatta caagattcaa agtgcgctgc tggtgccaac cctattctcc ttcttcgcca 5761 aaagcactct gattgacaaa tacgatttat ctaatttaca cgaaattgct tctggtggcg 5821 ctcccctctc taaggaagtc ggggaagcgg ttgccaagag gttccatctg ccaggtatca 5881 ggcaaggata tgggctcact gagactacat cagctattct gattacaccc gagggggatg 5941 ataaaccggg cgcggtcggt aaagttgttc cattttttga agcgaaggtt gtggatctgg 6001 ataccgggaa aacgctgggc gttaatcaaa gaggcgaact gtgtgtgaga ggtcctatga 6061 ttatgtccgg ttatgtaaac aatccggaag cgaccaacgc cttgattgac aaggatggat 6121 ggctacattc tggagacata gcttactggg acgaGgacga acacttcttc atcgttgacc 6181 gcctgaagtc tctgattaag tacaaaggct atcaggtggc tcccgctgaa ttggaatcca 6241 tcttgctcca acaccccaac atcttcgacg caggtgtcgc aggtctGccc gacgatgacg 6301 ccggtgaact tcccgccgcc gttgttgttt tggagcacgg aaagacgatg acggaaaaag 6361 agatcgtgga ttacgtcgcc agtcaagtaa caaccgcgaa aaagttgcgc ggaggagttg 6421 tgtttgtgga cgaagtaccg aaaggtctta ccggaaaact cgacgcaaga aaaatcagag 6481 agatcctcat aaaggccaag aagggcggaa agatcgccgt gggTTCGGAT TATAAGGACC 6541 ATGACGGAGA CTATAAGGAC CATGACCTCG ACGCTGCAGC AGCGGATTAT AAGGACGATG 6601 ACGATAAGTG AGCTTGTCCT GCTTTAATGA GATATGCGAG AAGCCTATGA TCGCATGATA 6661 TTTGCTTTCA ATTCTGTTGT GCACGTTGTA AAAAACCTGA GCATGTGTAG CTCAGATCCT 6721 TACCGCCGGT TTCGGTTCAT TCTAATGAAT ATATCACCCG TTACTATCGT ATTTTTATGA 6781 ATAATATTCT CCGTTCAATT TACTGATTGT ACCCTACTAC TTATATGTAC AATATTAAAA 6841 TGAAAACAAT ATATTGTGCT GAATAGGTTT ATAGCGACAT CTATGATAGA GCGCCACAAT 6901 AACAAACAAT TGCGTTTTAT TATTACAAAT CCAATTTTAA AAAAAGCGGC AGAACCGGTC 6961 AAACCTAAAA GACTGATTAC ATAAATCTTA TTCAAATTTC AAAAGTGCCC CAGGGGCTAG 7021 TATCTACGAC ACACCGAGCG GCGAACTAAT AACGCTCACT GAAGGGAACT CCGGTTCCCC 7081 GCCGGCGCGC ATGGGTGAGA TTCCTTGAAG TTGAGTATTG GCCGTCCGCT CTACCGAAAG 7141 TTACGGGCAC CATTCAACCC GGTCCAGCAC GGCGGCCGGG TAACCGACTT GCTGCCCCGA 7201 GAATTATGCA GCATTTTTTT GGTGTATGTG GGCCCCAAAT GAAGTGCAGG TCAAACCTTG 7261 ACAGTGACGA CAAATCGTTG GGCGGGTCCA GGGCGAATTT TGCGACAACA TGTCGAGGCT 7321 CAGCAGGACC GCT //