LOCUS       Seq1                    6858 bp    DNA     circular VRL 31-JUL-2020
DEFINITION  pBluescript II KS(+) ACMV DNA-A 1.4mer, African cassava mosaic
            virus CM:2:98.
ACCESSION   Seq1
VERSION
KEYWORDS    .
SOURCE      African cassava mosaic virus
  ORGANISM  African cassava mosaic virus
            Viruses; Monodnaviria; Shotokuvirae; Cressdnaviricota;
            Repensiviricetes; Geplafuvirales; Geminiviridae; Begomovirus.
REFERENCE   1  (bases 1 to 6858)
  AUTHORS   Fondong VN, Pita JS, Rey ME, de Kochko A, Beachy RN and Fauquet CM.
  TITLE     Evidence of synergism between African cassava mosaic virus and a
            new double-recombinant geminivirus infecting cassava in Cameroon
  JOURNAL   J. Gen. Virol. 81 (Pt 1), 287-297 (2000)
   PUBMED   10640569
REFERENCE   2  (bases 1 to 6858)
  AUTHORS   Hoyer,J.S., Fondong,V.N., Dallas,M.M., Aimone,C.D., Deppong,D.O.,
            Duffy,S. and Hanley-Bowdoin,L.
  TITLE     Deeply sequenced infectious clones of key cassava begomovirus
            isolates from Cameroon
  JOURNAL   unpublished
REFERENCE   3  (bases 1 to 6858)
  AUTHORS   Hoyer,J.S., Fondong,V.N., Dallas,M.M., Aimone,C.D., Deppong,D.O.,
            Duffy,S. and Hanley-Bowdoin,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (31-JUL-2020) Ecology, evolution, and natural resources,
            Rutgers University, 14 College Farm Rd, New Brunswick, NJ 08901, US
COMMENT     Bankit Comment: ALT EMAIL:j.s.hoyer@rutgers.edu
            Bankit Comment: Vecscreen Comment:Submitter says that this sequence
            is a Synthetic Construct
            Bankit Comment: TOTAL # OF SEQS:4
            
            ##Assembly-Data-START##
            Assembly Method       :: Benchling v. 2019-01-22
            Sequencing Technology :: Illumina
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..6858
                     /organism="African cassava mosaic virus"
                     /mol_type="other DNA"
                     /isolation_source="Cassava field, south-western rainforest
                     region"
                     /host="Manihot esculenta"
                     /db_xref="taxon:10817"
                     /country="Cameroon"
                     /collection_date="1998"
                     /collected_by="Vincent N. Fondong"
     misc_feature    1264..2403
                     /note="Duplicated part of ACMV DNA-A partial tandem dimer,
                     EcoRI to BamHI inclusive, copy 1"
     misc_feature    2404..4044
                     /note="Unique part of ACMV DNA-A partial tandem dimer,
                     EcoRI to BamHI, noninclusive"
     misc_feature    4045..5184
                     /note="Duplicated part of ACMV DNA-A partial tandem dimer,
                     EcoRI to BamHI inclusive, copy 2"
BASE COUNT     1759 a   1544 c   1691 g   1864 t
ORIGIN      
        1 taactgtcag accaagttta ctcatatata ctttagattg atttaaaact tcatttttaa
       61 tttaaaagga tctaggtgaa gatccttttt gataatctca tgaccaaaat cccttaacgt
      121 gagttttcgt tccactgagc gtcagacccc gtagaaaaga tcaaaggatc ttcttgagat
      181 cctttttttc tgcgcgtaat ctgctgcttg caaacaaaaa aaccaccgct accagcggtg
      241 gtttgtttgc cggatcaaga gctaccaact ctttttccga aggtaactgg cttcagcaga
      301 gcgcagatac caaatactgt ccttctagtg tagccgtagt taggccacca cttcaagaac
      361 tctgtagcac cgcctacata cctcgctctg ctaatcctgt taccagtggc tgctgccagt
      421 ggcgataagt cgtgtcttac cgggttggac tcaagacgat agttaccgga taaggcgcag
      481 cggtcgggct gaacgggggg ttcgtgcaca cagcccagct tggagcgaac gacctacacc
      541 gaactgagat acctacagcg tgagctatga gaaagcgcca cgcttcccga agggagaaag
      601 gcggacaggt atccggtaag cggcagggtc ggaacaggag agcgcacgag ggagcttcca
      661 gggggaaacg cctggtatct ttatagtcct gtcgggtttc gccacctctg acttgagcgt
      721 cgatttttgt gatgctcgtc aggggggcgg agcctatgga aaaacgccag caacgcggcc
      781 tttttacggt tcctggcctt ttgctggcct tttgctcaca tgttctttcc tgcgttatcc
      841 cctgattctg tggataaccg tattaccgcc tttgagtgag ctgataccgc tcgccgcagc
      901 cgaacgaccg agcgcagcga gtcagtgagc gaggaagcgg aagagcgccc aatacgcaaa
      961 ccgcctctcc ccgcgcgttg gccgattcat taatgcagct ggcacgacag gtttcccgac
     1021 tggaaagcgg gcagtgagcg caacgcaatt aatgtgagtt agctcactca ttaggcaccc
     1081 caggctttac actttatgct tccggctcgt atgttgtgtg gaattgtgag cggataacaa
     1141 tttcacacag gaaacagcta tgaccatgat tacgccaagc gcgcaattaa ccctcactaa
     1201 agggaacaaa agctgggtac cgggcccccc ctcgaggtcg acggtatcga taagcttgat
     1261 atcgaattcc ttaaagtgct ttaggtagtg tggatcgacg tcatcaatga cgttgtacca
     1321 agcagcatta ttgaagacct ttggactaag gtccaggtgt ccacacaggt aattgtgtgg
     1381 gcctaaagat ctggcccata tcgtcttccc tgttctgcta tcaccttcta tgacaatact
     1441 attgggtctc catggccgcg cagcggaagc cctaacatta tcagcgaccc attcttcaag
     1501 ttcatcagga acttggtcaa aggaagaaca tgggaaggga gaaatataag gagctggtgg
     1561 ctcctggaaa atcctttcta aattactatt tagattatga aactgaagta caaagtcctt
     1621 tgggactaat tccctaatga cattaagagc ttctgactta ctgccgctgt taagcgcttt
     1681 ggcgtaagca tcatttgcgg actgttgacc gcctctagca gatcgtccat cgatctgaaa
     1741 ttgtccccat tcgacggtgt cgccgtcctt atccaggtat gacttgacat ctgagcttga
     1801 tttggcacct tgaatgttgg ggtggaaact ggtgctacag cttgggtgta gacaatcgaa
     1861 gagacgattg ttcgtaatcg tgattttgcc ctcgaattgg atgagggcat gcaagtgagg
     1921 ttccccattc tgatgcagct ctctacagat tttaatgaac ttagggttag atgggagaga
     1981 gagtgtttga atgaatgaca gcaggtgttc tttggggata gaacactttg ggtatgtgag
     2041 aaagacattc ttggcttgaa ctctaaaacg aggagtcctc attttgacca agtcaattgg
     2101 agacactcaa ctagagacac tcttgagcat ctcctcctgt taattggaga cattatatag
     2161 gtgtctctaa atggcattct tgtaataagt taaactttaa tttgaatgaa aagcctcaaa
     2221 aggcgcataa cacccaaggg gccaaccgta taatattacc ggttggcccc gccccccttt
     2281 aaacgtggtc cccgcgcact atgtatgtcg gccaatcatg tcgtagcgtt aaaggttatt
     2341 tattagtggt gggccactat atacttgcag gcgaagtcgt tgctagtgcg caatgtggga
     2401 tccactggtg aatgagtttc ctgactcggt gcatgggctt aggtgtatgc ttgcaattaa
     2461 atatttgcag gccttagagg atacatacga gcccagtact ctgggccacg atctggttag
     2521 agatttagtc tcagttatca gggctcgtaa ttatgtcgaa gcgaccagga gatatcatca
     2581 tttccactcc aggctccaag gttcgtcgaa ggctgaactt cgacagccca tacaggaacc
     2641 gtgctactgc ccccactgtc cacgtcacaa atcgaaaacg ggcctggatg aacaggccca
     2701 tgtacagaaa gcccatgatg tacaggatgt atagaagccc agacataccc aggggctgtg
     2761 aaggcccatg taaggtccag tcgtttgagc agagggatga tgttaagcac cttggtatct
     2821 gtaaggtgat tagtgatgtg acacgtgggc ctgggctgac acacagggtc ggaaagaggt
     2881 tttgtatcaa gtccgtttac attcttggta agatctggat ggatgaaaat attaagaagc
     2941 agaatcacac taataatgtg atgttttacc tgcttaggga tagaaggcct tatggcaata
     3001 cgccccaaga ctttgggcag atatttaaca tgtttgataa tgagcccagt actgcaacaa
     3061 ttaagaacga tttgagggat aggtttcagg tgttgaggaa atttcatgcc actgttattg
     3121 gtggtccatc tggcatgaag gagcaggctt tggtgaaaag gttttacagg ttgaatcatc
     3181 acgtgacata taatcatcag gaggcaggga agtatgagaa tcacacagag aatgcgttgc
     3241 ttttgtacat ggcatgtact catgcctcca atcctgtata tgctacgttg aaaatacgta
     3301 tatacttcta tgacagtatt ggcaattaat aaatattgaa ttttatttca tgagtcaact
     3361 gacacgcaat agttttttca attacattga acaaaacatg atcagcagct ctaattacat
     3421 ggttaattga gataacacct atattatcca agtatttaag tacttggtat ctaaagaccc
     3481 ttaagaaaag accagtctga ggctgtaagg tcgtccagat cctgaagttg agaaaacatt
     3541 tgtgaatccc cagctccttc cgcaggttgt gattgaatcg aacctggact gttatgatgt
     3601 cctggttcag caggaatggt cgttgttggt gcctggttat tgtgaaatac aggggattgt
     3661 ttatttccca ggtatacacg ccattcattg cttgaggagc agtgatgagt tcccctgtgc
     3721 gtaaatccat gattggagca gttgatatgg aggtaatatg aacagccaca gacaagatcc
     3781 actctcctac gccggatggc tcgcttcttg aattgtctgt gactgacttt gattggaacc
     3841 tgagtagagt ggttctgtga gggtgatgaa gattgcattc tttaatgccc aggcctttag
     3901 cgcttcttgc ttttcctcgt ctaggaactc tttataggac gaggttggtc ctggattgca
     3961 gaggaagata gtgggaatgc cacctttaat ttgaacgggt ttcccgtatt ttgtgttgga
     4021 ctgccagtcc cgctgggacc ccatgaattc cttaaagtgc tttaggtagt gtggatcgac
     4081 gtcatcaatg acgttgtacc aagcagcatt attgaagacc tttggactaa ggtccaggtg
     4141 tccacacagg taattgtgtg ggcctaaaga tctggcccat atcgtcttcc ctgttctgct
     4201 atcaccttct atgacaatac tattgggtct ccatggccgc gcagcggaag ccctaacatt
     4261 atcagcgacc cattcttcaa gttcatcagg aacttggtca aaggaagaac atgggaaggg
     4321 agaaatataa ggagctggtg gctcctggaa aatcctttct aaattactat ttagattatg
     4381 aaactgaagt acaaagtcct ttgggactaa ttccctaatg acattaagag cttctgactt
     4441 actgccgctg ttaagcgctt tggcgtaagc atcatttgcg gactgttgac cgcctctagc
     4501 agatcgtcca tcgatctgaa attgtcccca ttcgacggtg tcgccgtcct tatccaggta
     4561 tgacttgaca tctgagcttg atttggcacc ttgaatgttg gggtggaaac tggtgctaca
     4621 gcttgggtgt agacaatcga agagacgatt gttcgtaatc gtgattttgc cctcgaattg
     4681 gatgagggca tgcaagtgag gttccccatt ctgatgcagc tctctacaga ttttaatgaa
     4741 cttagggtta gatgggagag agagtgtttg aatgaatgac agcaggtgtt ctttggggat
     4801 agaacacttt gggtatgtga gaaagacatt cttggcttga actctaaaac gaggagtcct
     4861 cattttgacc aagtcaattg gagacactca actagagaca ctcttgagca tctcctcctg
     4921 ttaattggag acattatata ggtgtctcta aatggcattc ttgtaataag ttaaacttta
     4981 atttgaatga aaagcctcaa aaggcgcata acacccaagg ggccaaccgt ataatattac
     5041 cggttggccc cgcccccctt taaacgtggt ccccgcgcac tatgtatgtc ggccaatcat
     5101 gtcgtagcgt taaaggttat ttattagtgg tgggccacta tatacttgca ggcgaagtcg
     5161 ttgctagtgc gcaatgtggg atccactagt tctagagcgg ccgccaccgc ggtggagctc
     5221 caattcgccc tatagtgagt cgtattacgc gcgctcactg gccgtcgttt tacaacgtcg
     5281 tgactgggaa aaccctggcg ttacccaact taatcgcctt gcagcacatc cccctttcgc
     5341 cagctggcgt aatagcgaag aggcccgcac cgatcgccct tcccaacagt tgcgcagcct
     5401 gaatggcgaa tgggacgcgc cctgtagcgg cgcattaagc gcggcgggtg tggtggttac
     5461 gcgcagcgtg accgctacac ttgccagcgc cctagcgccc gctcctttcg ctttcttccc
     5521 ttcctttctc gccacgttcg ccggctttcc ccgtcaagct ctaaatcggg ggctcccttt
     5581 agggttccga tttagtgctt tacggcacct cgaccccaaa aaacttgatt agggtgatgg
     5641 ttcacgtagt gggccatcgc cctgatagac ggtttttcgc cctttgacgt tggagtccac
     5701 gttctttaat agtggactct tgttccaaac tggaacaaca ctcaacccta tctcggtcta
     5761 ttcttttgat ttataaggga ttttgccgat ttcggcctat tggttaaaaa atgagctgat
     5821 ttaacaaaaa tttaacgcga attttaacaa aatattaacg cttacaattt aggtggcact
     5881 tttcggggaa atgtgcgcgg aacccctatt tgtttatttt tctaaataca ttcaaatatg
     5941 tatccgctca tgagacaata accctgataa atgcttcaat aatattgaaa aaggaagagt
     6001 atgagtattc aacatttccg tgtcgccctt attccctttt ttgcggcatt ttgccttcct
     6061 gtttttgctc acccagaaac gctggtgaaa gtaaaagatg ctgaagatca gttgggtgca
     6121 cgagtgggtt acatcgaact ggatctcaac agcggtaaga tccttgagag ttttcgcccc
     6181 gaagaacgtt ttccaatgat gagcactttt aaagttctgc tatgtggcgc ggtattatcc
     6241 cgtattgacg ccgggcaaga gcaactcggt cgccgcatac actattctca gaatgacttg
     6301 gttgagtact caccagtcac agaaaagcat cttacggatg gcatgacagt aagagaatta
     6361 tgcagtgctg ccataaccat gagtgataac actgcggcca acttacttct gacaacgatc
     6421 ggaggaccga aggagctaac cgcttttttg cacaacatgg gggatcatgt aactcgcctt
     6481 gatcgttggg aaccggagct gaatgaagcc ataccaaacg acgagcgtga caccacgatg
     6541 cctgtagcaa tggcaacaac gttgcgcaaa ctattaactg gcgaactact tactctagct
     6601 tcccggcaac aattaataga ctggatggag gcggataaag ttgcaggacc acttctgcgc
     6661 tcggcccttc cggctggctg gtttattgct gataaatctg gagccggtga gcgtgggtct
     6721 cgcggtatca ttgcagcact ggggccagat ggtaagccct cccgtatcgt agttatctac
     6781 acgacgggga gtcaggcaac tatggatgaa cgaaatagac agatcgctga gataggtgcc
     6841 tcactgatta agcattgg
//