LOCUS       Seq4                    7668 bp    DNA     circular VRL 31-JUL-2020
DEFINITION  pSL1180 EACMCV DNA-B 1.6mer, East African cassava mosaic Cameroon
            virus, 2007.
ACCESSION   Seq4
VERSION
KEYWORDS    .
SOURCE      East African cassava mosaic Cameroon virus
  ORGANISM  East African cassava mosaic Cameroon virus
            Viruses; Monodnaviria; Shotokuvirae; Cressdnaviricota;
            Repensiviricetes; Geplafuvirales; Geminiviridae; Begomovirus.
REFERENCE   1  (bases 1 to 7668)
  AUTHORS   Fondong VN, Pita JS, Rey ME, de Kochko A, Beachy RN and Fauquet CM.
  TITLE     Evidence of synergism between African cassava mosaic virus and a
            new double-recombinant geminivirus infecting cassava in Cameroon
  JOURNAL   J. Gen. Virol. 81 (Pt 1), 287-297 (2000)
   PUBMED   10640569
REFERENCE   2  (bases 1 to 7668)
  AUTHORS   Hoyer,J.S., Fondong,V.N., Dallas,M.M., Aimone,C.D., Deppong,D.O.,
            Duffy,S. and Hanley-Bowdoin,L.
  TITLE     Deeply sequenced infectious clones of key cassava begomovirus
            isolates from Cameroon
  JOURNAL   unpublished
REFERENCE   3  (bases 1 to 7668)
  AUTHORS   Hoyer,J.S., Fondong,V.N., Dallas,M.M., Aimone,C.D., Deppong,D.O.,
            Duffy,S. and Hanley-Bowdoin,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (31-JUL-2020) Ecology, evolution, and natural resources,
            Rutgers University, 14 College Farm Rd, New Brunswick, NJ 08901, US
COMMENT     Bankit Comment: ALT EMAIL:j.s.hoyer@rutgers.edu
            Bankit Comment: Vecscreen Comment:Submitter says that this sequence
            is a Synthetic Construct
            Bankit Comment: TOTAL # OF SEQS:4
            
            ##Assembly-Data-START##
            Assembly Method       :: Benchling v. 2019-01-22
            Sequencing Technology :: Illumina
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..7668
                     /organism="East African cassava mosaic Cameroon virus"
                     /mol_type="other DNA"
                     /isolation_source="Cassava field, south-western rainforest
                     region"
                     /host="Manihot esculenta"
                     /db_xref="taxon:223262"
                     /country="Cameroon"
                     /collection_date="2007"
                     /collected_by="Vincent N. Fondong"
     misc_feature    1245..2927
                     /note="Duplicated part of EACMCV DNA-B partial tandem
                     dimer, BclI to ClaI, inclusive, copy 1"
     misc_feature    2928..3976
                     /note="Unique part of EACMCV DNA-B partial tandem dimer,
                     ClaI to BclI, noninclusive"
     misc_feature    3977..5659
                     /note="Duplicated part of EACMCV DNA-B partial tandem
                     dimer, BclI to ClaI, inclusive, copy 2"
BASE COUNT     2019 a   1528 c   2055 g   2066 t
ORIGIN      
        1 taactgtcag accaagttta ctcatatata ctttagattg atttaaaact tcatttttaa
       61 tttaaaagga tctaggtgaa gatccttttt gataatctca tgaccaaaat cccttaacgt
      121 gagttttcgt tccactgagc gtcagacccc gtagaaaaga tcaaaggatc ttcttgagat
      181 cctttttttc tgcgcgtaat ctgctgcttg caaacaaaaa aaccaccgct accagcggtg
      241 gtttgtttgc cggatcaaga gctaccaact ctttttccga aggtaactgg cttcagcaga
      301 gcgcagatac caaatactgt tcttctagtg tagccgtagt taggccacca cttcaagaac
      361 tctgtagcac cgcctacata cctcgctctg ctaatcctgt taccagtggc tgctgccagt
      421 ggcgataagt cgtgtcttac cgggttggac tcaagacgat agttaccgga taaggcgcag
      481 cggtcgggct gaacgggggg ttcgtgcaca cagcccagct tggagcgaac gacctacacc
      541 gaactgagat acctacagcg tgagctatga gaaagcgcca cgcttcccga agggagaaag
      601 gcggacaggt atccggtaag cggcagggtc ggaacaggag agcgcacgag ggagcttcca
      661 gggggaaacg cctggtatct ttatagtcct gtcgggtttc gccacctctg acttgagcgt
      721 cgatttttgt gatgctcgtc aggggggcgg agcctatgga aaaacgccag caacgcggcc
      781 tttttacggt tcctggcctt ttgctggcct tttgctcaca tgttctttcc tgcgttatcc
      841 cctgattctg tggataaccg tattaccgcc tttgagtgag ctgataccgc tcgccgcagc
      901 cgaacgaccg agcgcagcga gtcagtgagc gaggaagcgg aagagcgccc aatacgcaaa
      961 ccgcctctcc ccgcgcgttg gccgattcat taatgcagct ggcacgacag gtttcccgac
     1021 tggaaagcgg gcagtgagcg caacgcaatt aatgtgagtt agctcactca ttaggcaccc
     1081 caggctttac actttatgct tccggctcgt atgttgtgtg gaattgtgag cggataacaa
     1141 tttcacacag gaaacagcta tgacatgatt acgaattcga atggccatgg gacgtcgacc
     1201 tgaggtaatt ataacccggg ccctatatat ggatccaatt gcaatgatca gatgtgatgc
     1261 gccgtgtcgt taaagtatat cgtattgggt ctttatatag gcgttaataa gtgacacgtg
     1321 gtagagagag aaagaagaga gaagcgagag cattcggggg acactcaaaa ctccagggaa
     1381 acggtggaac ggggggcaat atatatgatg tcccccaatg gcatatgtgt aaataggtag
     1441 acttccattt gaattgaaaa gtaggatctg tgtaattgcg gccatccgat taatattacc
     1501 ggatggccgc tttggtggac gcgtggacgt tggcgaatgg gtgggtccga cagaaagcgt
     1561 tagtgcgttc cagcagatgg aaaaggagag catgtggtcc tgtagacatt tttattataa
     1621 tgaaattgcg cgagtgttgt actgacacgt ggcaagaggg attgttaata tcattgtcgt
     1681 ggtgggtccg ttaaatagat gttaatgggt ttaaggactg gtatattggg gagccacgtg
     1741 tatgcatgat agtgtctcag atgtgtataa atatccgagc atgttaaggg gttctaccac
     1801 accatgtata ctacgcctag gcgtgggtat agatcagcgt ataggcctcg tgccatacgt
     1861 cgaaattatg cgaaaacgcc gtataaaccg gtaacgaaac cgcccgttaa cagaaggata
     1921 acatttgatt cgtcgaaaca ggtgtatgtg aggaggtcga tagaggatgt gcacagtggg
     1981 gcgaatatgc agttggctaa tcagggtcag caaacgtcgt atgtgaactt tccatcgctc
     2041 ggagttgatg gtaatggggg taggtgtttc gatcacatta agcttttaaa cttacgggtg
     2101 tcggggaccg ttagcgtcac gcaaattgga ggagacgatc ctatgggaga gcagtctcta
     2161 ttgaggggta tttttttaat ggccgttatt gtggacaaaa gaccatttgt ccccgaaggt
     2221 gtcaacacgt tgcctacgtt taaggaatta tttggagagt atgataccgt ctacggcaat
     2281 cctaggttaa aggataatat tcgacatcgt tatcgtctgc ttgggaccgt taaacagtat
     2341 ataactacgg aggaagctca tgtacaaaag ccggtgaatt taagacgaaa gttaagtaac
     2401 gcccggtatc ccgtgtggtc ttcgttcaag gatttggatg ctagtagtac tgggggtaat
     2461 tataagaatg ttaacaagaa tgctattctt gtgagttatg tatgggtgtc ttgcgaacgt
     2521 agcaagtgtg acgtgtatgc acaatttgta ttaaattatg tgggatgata ataaaaggtt
     2581 ttaattgtgc gcaatatcaa ccatttggag caagtgataa cagtgtggac atatagataa
     2641 atgtatgtgt tgtaaacgaa atatgattaa ggggggaaac aaaaccagta aatacaaaat
     2701 acatatatct acaactgtcg cggtgtctcg cattgagttt taatgaggca tcggttaatg
     2761 gttgtctcga tgagggattc aaggtccttg cgtgagactg tgtccgatgg tgtttgtgac
     2821 actgaatcgc cagggtctaa tactggtgtg cttaatctat agagtccttg atatgggtat
     2881 tcggttgagt cgttgtccgc gtctagtggt cgtgtggtcg gatcgatgcg catcgactgt
     2941 gatcgcatac atcctatgtc ccgttggctt gatgagcatg gtaggccgag ttgtgatttg
     3001 gtagcccatg tttcgccagg tagaatggtt atgggcctgt gggcgatggg tctttgacta
     3061 tgggctgttg gagtcggatt tagtaatctc cgtcttgttt cccctttttc cacggaccag
     3121 aagtctatgc aatcttttgt gtatcccttg gataatatgt tgattgttgg gggcttgaat
     3181 cgtatgtccg tggaatgttt ggccgatgat aatcggagct tcgccttgat ggatgcgaat
     3241 ttcacgcctt cgacgacgtt agagtcttcg actctgtaca tgatgctcca aggggagggt
     3301 tctgaaatcg aaaaatatgt tgaagagaag tagtggaggt ctacgttgca agcgattggg
     3361 aaagtgaatg cagcttgagc tgcgtcttca aggctgacgc gattgtctcg gatttcgacg
     3421 atgaccgatc cagttgcgtt aaatgggacc tggtttcggt attcaattat aatgtggtcg
     3481 attttcatac atcggccttt gagtcgcatg gtagcctgct cgaatgagct agggaattgg
     3541 agatgaatgg gtgcagcatc gtttgttaat acatactcgg tgcgtttgct gtgtatgtaa
     3601 gtattgtcgg tgacggtgaa ttggttgtcc atgctaagaa gtaaaaaaca agggtgagga
     3661 aacggataga agagatgtat aaaagtgaga acaaggttag aaaatgttta gagacatgga
     3721 aacaaatagg catttgagac atataaaaac atactaaatc agaacaatta tcatatatgt
     3781 atgactggcc gcgcagcgga atggaaggca gataaatcgg cgaacaaaga aaaaaagcga
     3841 agtgggttat gtgatgtaaa tcacttacgg aatcaccggt gaagcagtcg tgaaggaatg
     3901 cctcggccaa gggcgagaaa acaaaaaata aatgttaagg aaataaaagt tgaacgtatt
     3961 gggataaaaa ggaaagtgat cagatgtgat gcgccgtgtc gttaaagtat atcgtattgg
     4021 gtctttatat aggcgttaat aagtgacacg tggtagagag agaaagaaga gagaagcgag
     4081 agcattcggg ggacactcaa aactccaggg aaacggtgga acggggggca atatatatga
     4141 tgtcccccaa tggcatatgt gtaaataggt agacttccat ttgaattgaa aagtaggatc
     4201 tgtgtaattg cggccatccg attaatatta ccggatggcc gctttggtgg acgcgtggac
     4261 gttggcgaat gggtgggtcc gacagaaagc gttagtgcgt tccagcagat ggaaaaggag
     4321 agcatgtggt cctgtagaca tttttattat aatgaaattg cgcgagtgtt gtactgacac
     4381 gtggcaagag ggattgttaa tatcattgtc gtggtgggtc cgttaaatag atgttaatgg
     4441 gtttaaggac tggtatattg gggagccacg tgtatgcatg atagtgtctc agatgtgtat
     4501 aaatatccga gcatgttaag gggttctacc acaccatgta tactacgcct aggcgtgggt
     4561 atagatcagc gtataggcct cgtgccatac gtcgaaatta tgcgaaaacg ccgtataaac
     4621 cggtaacgaa accgcccgtt aacagaagga taacatttga ttcgtcgaaa caggtgtatg
     4681 tgaggaggtc gatagaggat gtgcacagtg gggcgaatat gcagttggct aatcagggtc
     4741 agcaaacgtc gtatgtgaac tttccatcgc tcggagttga tggtaatggg ggtaggtgtt
     4801 tcgatcacat taagctttta aacttacggg tgtcggggac cgttagcgtc acgcaaattg
     4861 gaggagacga tcctatggga gagcagtctc tattgagggg tattttttta atggccgtta
     4921 ttgtggacaa aagaccattt gtccccgaag gtgtcaacac gttgcctacg tttaaggaat
     4981 tatttggaga gtatgatacc gtctacggca atcctaggtt aaaggataat attcgacatc
     5041 gttatcgtct gcttgggacc gttaaacagt atataactac ggaggaagct catgtacaaa
     5101 agccggtgaa tttaagacga aagttaagta acgcccggta tcccgtgtgg tcttcgttca
     5161 aggatttgga tgctagtagt actgggggta attataagaa tgttaacaag aatgctattc
     5221 ttgtgagtta tgtatgggtg tcttgcgaac gtagcaagtg tgacgtgtat gcacaatttg
     5281 tattaaatta tgtgggatga taataaaagg ttttaattgt gcgcaatatc aaccatttgg
     5341 agcaagtgat aacagtgtgg acatatagat aaatgtatgt gttgtaaacg aaatatgatt
     5401 aaggggggaa acaaaaccag taaatacaaa atacatatat ctacaactgt cgcggtgtct
     5461 cgcattgagt tttaatgagg catcggttaa tggttgtctc gatgagggat tcaaggtcct
     5521 tgcgtgagac tgtgtccgat ggtgtttgtg acactgaatc gccagggtct aatactggtg
     5581 tgcttaatct atagagtcct tgatatgggt attcggttga gtcgttgtcc gcgtctagtg
     5641 gtcgtgtggt cggatcgata cgcgtacgtc gcgaccgcgg acatgtacag agctcgagaa
     5701 gtactagtgg ccacgtgggc cgtgcacctt aagcttggca ctggccgtcg ttttacaacg
     5761 tcgtgactgg gaaaaccctg gcgttaccca acttaatcgc cttgcagcac atcccccttt
     5821 cgccagctgg cgtaatagcg aagaggcccg caccgatcgc ccttcccaac agttgcgcag
     5881 cctgaatggc gaatggcgcc tgatgcggta ttttctcctt acgcatctgt gcggtatttc
     5941 acaccgcata cgtcaaagca accatagtac gcgccctgta gcggcgcatt aagcgcggcg
     6001 ggtgtggtgg ttacgcgcag cgtgaccgct acacttgcca gcgccctagc gcccgctcct
     6061 ttcgctttct tcccttcctt tctcgccacg ttcgccggct ttccccgtca agctctaaat
     6121 cgggggctcc ctttagggtt ccgatttagt gctttacggc acctcgaccc caaaaaactt
     6181 gatttgggtg atggttcacg tagtgggcca tcgccctgat agacggtttt tcgccctttg
     6241 acgttggagt ccacgttctt taatagtgga ctcttgttcc aaactggaac aacactcaac
     6301 cctatctcgg gctattcttt tgatttataa gggattttgc cgatttcggc ctattggtta
     6361 aaaaatgagc tgatttaaca aaaatttaac gcgaatttta acaaaatatt aacgtttaca
     6421 attttatggt gcactctcag tacaatctgc tctgatgccg catagttaag ccagccccga
     6481 cacccgccaa cacccgctga cgcgccctga cgggcttgtc tgctcccggc atccgcttac
     6541 agacaagctg tgaccgtctc cgggagctgc atgtgtcaga ggttttcacc gtcatcaccg
     6601 aaacgcgcga gacgaaaggg cctcgtgata cgcctatttt tataggttaa tgtcatgata
     6661 ataatggttt cttagacgtc aggtggcact tttcggggaa atgtgcgcgg aacccctatt
     6721 tgtttatttt tctaaataca ttcaaatatg tatccgctca tgagacaata accctgataa
     6781 atgcttcaat aatattgaaa aaggaagagt atgagtattc aacatttccg tgtcgccctt
     6841 attccctttt ttgcggcatt ttgccttcct gtttttgctc acccagaaac gctggtgaaa
     6901 gtaaaagatg ctgaagatca gttgggtgca cgagtgggtt acatcgaact ggatctcaac
     6961 agcggtaaga tccttgagag ttttcgcccc gaagaacgtt ttccaatgat gagcactttt
     7021 aaagttctgc tatgtggcgc ggtattatcc cgtattgacg ccgggcaaga gcaactcggt
     7081 cgccgcatac actattctca gaatgacttg gttgagtact caccagtcac agaaaagcat
     7141 cttacggatg gcatgacagt aagagaatta tgcagtgctg ccataaccat gagtgataac
     7201 actgcggcca acttacttct gacaacgatc ggaggaccga aggagctaac cgcttttttg
     7261 cacaacatgg gggatcatgt aactcgcctt gatcgttggg aaccggagct gaatgaagcc
     7321 ataccaaacg acgagcgtga caccacgatg cctgtagcaa tggcaacaac gttgcgcaaa
     7381 ctattaactg gcgaactact tactctagct tcccggcaac aattaataga ctggatggag
     7441 gcggataaag ttgcaggacc acttctgcgc tcggcccttc cggctggctg gtttattgct
     7501 gataaatctg gagccggtga gcgtgggtct cgcggtatca ttgcagcact ggggccagat
     7561 ggtaagccct cccgtatcgt agttatctac acgacgggga gtcaggcaac tatggatgaa
     7621 cgaaatagac agatcgctga gataggtgcc tcactgatta agcattgg
//
