LOCUS       Exported                7104 bp ds-DNA     circular SYN 26-JUL-2022
DEFINITION  synthetic circular DNA
ACCESSION   .
VERSION     .
KEYWORDS    .
SOURCE      synthetic DNA construct
  ORGANISM  synthetic DNA construct
REFERENCE   1  (bases 1 to 7104)
  AUTHORS   Merlin Brychcy
  TITLE     Direct Submission
  JOURNAL   Exported Friday, Jul 29, 2022 from SnapGene 5.0.8
            https://www.snapgene.com
FEATURES             Location/Qualifiers
     source          1..7104
                     /organism="synthetic DNA construct"
                     /mol_type="other DNA"
     misc_feature    1..22
                     /label=GG1D
                     /note="GG1D"
     protein_bind    123..144
                     /label=E. coli catabolite activator protein binding site
                     /bound_moiety="E. coli catabolite activator protein"
                     /note="CAP binding site"
                     /note="CAP binding activates transcription in the presence
                     of cAMP."
     promoter        159..189
                     /note="lac promoter"
                     /note="promoter for the E. coli lac operon"
     protein_bind    197..213
                     /label=lac repressor encoded by lacI binding site
                     /bound_moiety="lac repressor encoded by lacI"
                     /note="lac operator"
                     /note="The lac repressor binds to the lac operator to
                     inhibit transcription in E. coli. This inhibition can be 
                     relieved by adding lactose or 
                     isopropyl-beta-D-thiogalactopyranoside (IPTG)."
     RBS             231..242
                     /note="strong bacterial ribosome binding site (Elowitz and 
                     Leibler, 2000)"
     CDS             249..926
                     /codon_start=1
                     /product="monomeric derivative of DsRed (Campbell et al.,
                     2002)"
                     /label=monomeric derivative of DsRed (Campbell et al.,
                     /note="mRFP1"
                     /translation="MASSEDVIKEFMRFKVRMEGSVNGHEFEIEGEGEGRPYEGTQTAK
                     LKVTKGGPLPFAWDILSPQFQYGSKAYVKHPADIPDYLKLSFPEGFKWERVMNFEDGGV
                     VTVTQDSSLQDGEFIYKVKLRGTNFPSDGPVMQKKTMGWEASTERMYPEDGALKGEIKM
                     RLKLKDGGHYDAEVKTTYMAKKPVQLPGAYKTDIKLDITSHNEDYTIVEQYERAEGRHS
                     TGA"
     terminator      971..1042
                     /note="rrnB T1 terminator"
                     /note="transcription terminator T1 from the E. coli rrnB
                     gene"
     terminator      1058..1085
                     /note="T7Te terminator"
                     /note="phage T7 early transcription terminator"
     misc_feature    1092..1113
                     /label=GG1D
                     /note="GG1D1"
     primer_bind     1114..1139
                     /label=ori_pstI_f
     regulatory      1120..1149
                     /regulatory_class="promoter"
                     /label=putative MobA/MobL gene predicted promoter
                     /note="putative MobA/MobL gene predicted promoter"
     CDS             1273..1833
                     /codon_start=1
                     /product="putative MobA/MobL protein"
                     /label=putative MobA/MobL protein
                     /note="contains MobA/MobL family domain; may be involved
                     in plasmid mobilization"
                     /protein_id="AUJ88093.1"
                     /translation="MLTRWDNDQSSLSIYHREIKEEQQEQQRKQQQIERETKQKQEDDK
                     KKRQDYERYLSKYGYVKDAEYDHISDHVASDISMFTRLQAQAWASNDMQEYIRCSKQKY
                     EQISDRIAYERDLKKIGQLSRILDKDRQALADILPQLMPYYEQMQQAVNKRKILLENER
                     QPSFKPRYDQEQPKPKKDNDLTF"
     regulatory      1817..1844
                     /regulatory_class="promoter"
                     /label=putative antitoxin-toxin module-predicted promoter
                     /note="putative antitoxin-toxin module-predicted promoter"
     CDS             1878..2171
                     /codon_start=1
                     /product="putative PaaA2-like antitoxin"
                     /label=putative PaaA2-like antitoxin
                     /note="putative component of an antitoxin-toxin system
                     involved in plasmid stability and maintenance"
                     /protein_id="AUJ88095.1"
                     /translation="MTEATFTFRVDHDLKQEFSSLAKTVDRSGAQLIRDFMRDFVKKQQ
                     EAADYDKWFKQQVQIGLNEANAGKLIPHEDVKAEFAARRAATLAKLAAKNED"
     CDS             2161..2430
                     /codon_start=1
                     /product="putative ParE2-like toxin"
                     /label=putative ParE2-like toxin
                     /note="putative component of an antitoxin-toxin system
                     involved in plasmid stability and maintenance"
                     /protein_id="AUJ88096.1"
                     /translation="MKIEWTETARQDRRNIYDYLEERNPIAAIEIDDLIEEKTDLLVDN
                     RLMGRTGRQKDTRELVIHPHYVVVYDITDIIRILRVLHTSQEWS"
     regulatory      2194..3530
                     /regulatory_class="replication_regulatory_region"
                     /note="minimal origin of replication for Acinetobacter
                     sp."
     regulatory      3703..3729
                     /regulatory_class="promoter"
                     /label=putative RCR protein gene predicted promoter
                     /note="putative RCR protein gene predicted promoter"
     CDS             3782..4057
                     /codon_start=1
                     /product="putative RCR protein"
                     /label=putative RCR protein
                     /note="contains a domain belonging to RepB proteins; may
                     be involved in rolling circle replication (RCR)"
                     /protein_id="AUJ88097.1"
                     /translation="MIYYMGVKDMKDPNDQKTQDMLKEPPKTNAERQKAYREKRKSLDS
                     QRLEVFIDKGVSDMLADMVGAAGESQKAILTALIEKEYKRLYAVKK"
     regulatory      4106..4126
                     /regulatory_class="terminator"
                     /note="bidirectional Rho-independent transcriptional
                     terminator"
     CDS             complement(4145..4414)
                     /codon_start=1
                     /product="putative MobA/MobL protein"
                     /label=putative MobA/MobL protein
                     /note="contains MobA/MobL family domain; may be involved
                     in plasmid mobilization"
                     /protein_id="AUJ88098.1"
                     /translation="MVKKTAMELGQMLDEEKEKLERQEKARKDLADAVVKGREQKQARS
                     DDAKRKILIGAYLLKKHDNDIKKLVEQNPDFIGYIRENDKHLFS"
     regulatory      complement(4447..4472)
                     /regulatory_class="promoter"
                     /label=putative MobA/MobL gene predicted promoter
                     /note="putative MobA/MobL gene predicted promoter"
     regulatory      4583..4609
                     /regulatory_class="promoter"
                     /label=putative nickase-like gene predicted promoter
                     /note="putative nickase-like gene predicted promoter"
     CDS             4699..5040
                     /codon_start=1
                     /product="putative nickase-like protein"
                     /label=putative nickase-like protein
                     /note="may be involved in rolling circle replication
                     (RCR)"
                     /protein_id="AUJ88099.1"
                     /translation="MKMAIYHCEMQNISRSDGRSIVACAAYRAGEKLYCDTYGKEQDYT
                     KKTGIEYTQIFAPTGASPDMLDRQTLWNRVEQSELKKNGDIKQEARLAKEVEIALPHEL
                     DKTQRQATC"
     rep_origin      complement(5223..5811)
                     /direction=LEFT
                     /label=ori
                     /note="ori"
                     /note="high-copy-number ColE1/pMB1/pBR322/pUC origin of 
                     replication"
     CDS             complement(5982..6842)
                     /codon_start=1
                     /gene="bla"
                     /product="beta-lactamase"
                     /label=bla
                     /note="AmpR"
                     /note="confers resistance to ampicillin, carbenicillin, and
                     related antibiotics"
                     /translation="MSIQHFRVALIPFFAAFCLPVFAHPETLVKVKDAEDQLGARVGYI
                     ELDLNSGKILESFRPEERFPMMSTFKVLLCGAVLSRIDAGQEQLGRRIHYSQNDLVEYS
                     PVTEKHLTDGMTVRELCSAAITMSDNTAANLLLTTIGGPKELTAFLHNMGDHVTRLDRW
                     EPELNEAIPNDERDTTMPVAMATTLRKLLTGELLTLASRQQLIDWMEADKVAGPLLRSA
                     LPAGWFIADKSGAGERGSRGIIAALGPDGKPSRIVVIYTTGSQATMDERNRQIAEIGAS
                     LIKHW"
     promoter        complement(6843..6947)
                     /gene="bla"
                     /label=bla promoter
                     /note="AmpR promoter"
     terminator      7037..7080
                     /note="bacterial terminator"
                     /note="putative bacterial transcription terminator"
     misc_feature    7083..7102
                     /label=BioBrick prefix
                     /note="BioBrick prefix"
                     /note="BioBrick prefix for parts that start with ""ATG"""
ORIGIN
        1 cgtctcagaa gctatagaga cccaatacgc aaaccgcctc tccccgcgcg ttggccgatt
       61 cattaatgca gctggcacga caggtttccc gactggaaag cgggcagtga gcgcaacgca
      121 attaatgtga gttagctcac tcattaggca ccccaggctt tacactttat gcttccggct
      181 cgtatgttgt gtggaattgt gagcggataa caatttcaca catactagag aaagaggaga
      241 aatactagat ggcttcctcc gaagacgtta tcaaagagtt catgcgtttc aaagttcgta
      301 tggaaggttc cgttaacggt cacgagttcg aaatcgaagg tgaaggtgaa ggtcgtccgt
      361 acgaaggtac ccagaccgct aaactgaaag ttaccaaagg tggtccgctg ccgttcgctt
      421 gggacatcct gtccccgcag ttccagtacg gttccaaagc ttacgttaaa cacccggctg
      481 acatcccgga ctacctgaaa ctgtccttcc cggaaggttt caaatgggaa cgtgttatga
      541 acttcgaaga cggtggtgtt gttaccgtta cccaggactc ctccctgcaa gacggtgagt
      601 tcatctacaa agttaaactg cgtggtacca acttcccgtc cgacggtccg gttatgcaga
      661 aaaaaaccat gggttgggaa gcttccaccg aacgtatgta cccggaagac ggtgctctga
      721 aaggtgaaat caaaatgcgt ctgaaactga aagacggtgg tcactacgac gctgaagtta
      781 aaaccaccta catggctaaa aaaccggttc agctgccggg tgcttacaaa accgacatca
      841 aactggacat cacctcccac aacgaagact acaccatcgt tgaacagtac gaacgtgctg
      901 aaggtcgtca ctccaccggt gcttaataac gctgatagtg ctagtgtaga tcgctactag
      961 agccaggcat caaataaaac gaaaggctca gtcgaaagac tgggcctttc gttttatctg
     1021 ttgtttgtcg gtgaacgctc tctactagag tcacactggc tcaccttcgg gtgggccttt
     1081 ctgcgtttat aggtctcatg ttttagagag acgctgcagt tgcaagacaa tatcgaccgc
     1141 ttgcagcttg ataaagtgat caaagaggga cgagcagcta cagcactgct aagggagatc
     1201 ggagagccac tgccgccacc agtgaaagtg aaaacaggtt ggtttagtgc tgattattac
     1261 ggctttgagg acatgctcac acgttgggat aatgatcaat ctagcctttc catttatcac
     1321 agagagataa aagaggagca acaggaacag caacgaaaac aacagcagat agaaagagaa
     1381 actaaacaaa aacaggaaga tgacaaaaag aaacggcagg actatgaaag atatttatca
     1441 aaatacggct atgtcaaaga tgctgagtat gaccatatca gcgaccatgt tgcttcagac
     1501 atttccatgt ttacacgtct tcaggcgcag gcatgggcaa gtaacgatat gcaagagtac
     1561 ataaggtgtt caaagcaaaa atacgagcag atcagcgaca gaatagccta tgagcgtgac
     1621 ttgaaaaaaa tcgggcaatt gagccgtatc ctggataaag acagacaggc acttgctgat
     1681 attttaccgc agttgatgcc ttactatgag cagatgcaac aggctgttaa taaacggaaa
     1741 attttacttg agaatgagcg acagccatca tttaaaccac gttatgacca agaacagcct
     1801 aagccgaaaa aagacaatga cctaactttt taatgtgtta caatagcatt caaatgtaac
     1861 acattggagt gaaaaacatg acagaagcga cttttacctt tcgggtagac catgacctaa
     1921 agcaagaatt ttcaagcctt gctaagactg ttgatcggtc gggggcgcag ctaatccgtg
     1981 acttcatgcg tgactttgtt aagaagcaac aggaagccgc agactatgac aaatggttca
     2041 agcagcaggt acagatcggc ttaaatgaag ccaatgcagg caagttgatt ccacatgagg
     2101 acgtaaaggc agagtttgcc gctagacgtg ctgcaacatt ggcgaaactg gcagcgaaga
     2161 atgaagattg agtggactga aacagctcgc caagatcgta gaaatatcta tgattatctt
     2221 gaagaacgca accctatagc agctattgaa attgatgatt taattgaaga aaagacagat
     2281 ttacttgttg ataatcgact gatggggcgc acaggcagac agaaagatac tagggagtta
     2341 gtgatacatc cgcattatgt ggttgtatat gacatcactg atataatacg gatactcaga
     2401 gtgctacaca catcgcagga gtggtcatga cttactcatg tactttggat tatttagtgt
     2461 tataaaatcc tgatttataa attttttttg ttaaaaaaga taaaagcccc ttgcaattgc
     2521 ttggggcttt accgtaattt atggggtaca gatcttcgat actgacatat cggcaatcga
     2581 aagcattaag gtttgacgac cgctaatgat ttcaccacag gggcttaatg tacctgtctt
     2641 aaattctaag gttttaactc gctttgtcaa gcatagaccc caaaaattta gccaatgtct
     2701 gtaactcaat ctgtccatgt gtgggtgatg aggtacagtg acgctagcac acatcggaaa
     2761 aacgctatta ctaggggaac tgaacagagt agcggacgca atgagtagtc atttaattgg
     2821 cggttatgag cgtgttcagg cggtgctatc aatcgtaatc ataacagtgg cagcttgata
     2881 cagtgatgtc atccctgatg cgaaagcgac cgaccgacgg tacatcgaat gggaatactt
     2941 tagggtgatt tttaagaatc gctctagggt gagtatttcc cattcagctc tgctccctcc
     3001 ctctggtact ttaatcaaaa gcactactaa acatatgttt ttaaataaaa aatattgata
     3061 tagagataat attagtaaga ataattaaac aattgaatat agataaatca ttgttaaata
     3121 aagattaatt attaaaatga atgtatactt atatataaat caatgattta aaatatttga
     3181 taaagaaaac ttttcaaaaa aaatataatt gagattgtgt catttcggtc aattcttaat
     3241 atgttccacg caagttttag ctatggtgct aaacagaaat ttgctgaaaa agaacttttc
     3301 actgaactgg ttaaaatgta agcagcctga gagccgccaa aaattttaaa aacaaaccgc
     3361 cttaatcatc ttcaaaaaat acctctaaaa cctcaccatt tgcgttttaa gacccatatt
     3421 tcatcctgcc cttatgttcc catgctgata gctataaagt gtctgtaatc gcttcctatg
     3481 acgttctagg ctgttgataa cttttggaac aacgcaaaat gttaaaatcc gatcattttt
     3541 taacctagtt attttcgtta cagggtaact ttggtagtat tatttcaata tttagttgtt
     3601 acaggataac aaaatatatg ttacagggta attaatttag cgttacagga taactatagt
     3661 tacagggtaa cgttaaatag ttatcctgta atttaaaaat agttgcagga tagcataaat
     3721 ttttacaaat aaattttata aaaagttatc ctgtaactaa aaacaatgtt atcctgtaac
     3781 tatgatatac tatatgggag ttaaagacat gaaagacccg aacgatcaga aaacacagga
     3841 catgctaaaa gagccgccaa aaaccaatgc cgaacgacaa aaagcatatc gtgaaaaacg
     3901 caaaagcctt gatagtcaac gtttggaggt gtttatagat aagggtgtgt cggatatgct
     3961 tgcggacatg gtgggcgcag caggggagag ccaaaaagcc attttgaccg cattgattga
     4021 gaaagagtat aagcggctgt atgcagtgaa aaaatagcaa gctaaaaaag tacattgatt
     4081 caaaaagtaa tgcagataaa aaagaaaccc tcgatttatg agggtttttt ataactacta
     4141 atgcctatga aaataagtgc ttatcatttt ctctaatgta cccaataaaa tcggggtttt
     4201 gttccacaag tttcttgatg tcattatcat gtttcttcag taagtaagcc ccgatcagga
     4261 tcttgcgttt tgcatcgtct gaccttgcct gtttttgctc tcgacctttc accacagcgt
     4321 cagctagatc ctttcttgcc ttttcctgac gttccaattt ttccttttct tcatcgagca
     4381 tttgacccaa ttccatagct gtttttttga ccatttttaa tgcctgtgtc tcaacctatt
     4441 ttccgaagta tgaaccatca tcaatgtgaa aagtgttcta cttcaaaaac tcgacttaca
     4501 tcaagatccg agcgcagcga gcaaaatcaa aaaacaaagt caaagcctta ttgctcttgc
     4561 ttttgctttt agcctcgcag agttcccgaa gggcgcactt acgcaaaatt tttgctacgc
     4621 caaattttgc aagtacggtc agggaaaccc cgacacccca accgcccaaa acttggggcg
     4681 gctgttaata aacaggtgat gaaaatggca atttaccatt gtgaaatgca gaacatttcg
     4741 aggtcagatg gtcgctcaat cgtggcatgt gcagcatacc gagcaggcga aaaattgtac
     4801 tgtgatacgt acggaaaaga gcaggactac accaaaaaaa caggcattga atacacccaa
     4861 atttttgccc caactggggc aagtcctgac atgttagatc gtcaaaccct atggaatcgg
     4921 gtagagcaat ccgaactaaa aaagaacggt gacatcaaac aggaggcaag attagcaaag
     4981 gaagtagaga tagcattgcc gcatgaactg gataagacac agcgtcaggc aacttgttaa
     5041 ctgcaggctt cctcgctcac tgactcgctg cgctcggtcg ttcggctgcg gcgagcggta
     5101 tcagctcact caaaggcggt aatacggtta tccacagaat caggggataa cgcaggaaag
     5161 aacatgtgag caaaaggcca gcaaaaggcc aggaaccgta aaaaggccgc gttgctggcg
     5221 tttttccata ggctccgccc ccctgacgag catcacaaaa atcgacgctc aagtcagagg
     5281 tggcgaaacc cgacaggact ataaagatac caggcgtttc cccctggaag ctccctcgtg
     5341 cgctctcctg ttccgaccct gccgcttacc ggatacctgt ccgcctttct cccttcggga
     5401 agcgtggcgc tttctcatag ctcacgctgt aggtatctca gttcggtgta ggtcgttcgc
     5461 tccaagctgg gctgtgtgca cgaacccccc gttcagcccg accgctgcgc cttatccggt
     5521 aactatcgtc ttgagtccaa cccggtaaga cacgacttat cgccactggc agcagccact
     5581 ggtaacagga ttagcagagc gaggtatgta ggcggtgcta cagagttctt gaagtggtgg
     5641 cctaactacg gctacactag aaggacagta tttggtatct gcgctctgct gaagccagtt
     5701 accttcggaa aaagagttgg tagctcttga tccggcaaac aaaccaccgc tggtagcggt
     5761 ggtttttttg tttgcaagca gcagattacg cgcagaaaaa aaggatctca agaagatcct
     5821 ttgatctttt ctacggggtc tgacgctcag tggaacgaaa actcacgtta agggattttg
     5881 gtcatgagat tatcaaaaag gatcttcacc tagatccttt taaattaaaa atgaagtttt
     5941 aaatcaatct aaagtatata tgagtaaact tggtctgaca gttaccaatg cttaatcagt
     6001 gaggcaccta tctcagcgat ctgtctattt cgttcatcca tagttgcctg actccccgtc
     6061 gtgtagataa ctacgatacg ggagggctta ccatctggcc ccagtgctgc aatgataccg
     6121 cgagagccac gctcaccggc tccagattta tcagcaataa accagccagc cggaagggcc
     6181 gagcgcagaa gtggtcctgc aactttatcc gcctccatcc agtctattaa ttgttgccgg
     6241 gaagctagag taagtagttc gccagttaat agtttgcgca acgttgttgc cattgctaca
     6301 ggcatcgtgg tgtcacgctc gtcgtttggt atggcttcat tcagctccgg ttcccaacga
     6361 tcaaggcgag ttacatgatc ccccatgttg tgcaaaaaag cggttagctc cttcggtcct
     6421 ccgatcgttg tcagaagtaa gttggccgca gtgttatcac tcatggttat ggcagcactg
     6481 cataattctc ttactgtcat gccatccgta agatgctttt ctgtgactgg tgagtactca
     6541 accaagtcat tctgagaata gtgtatgcgg cgaccgagtt gctcttgccc ggcgtcaata
     6601 cgggataata ccgcgccaca tagcagaact ttaaaagtgc tcatcattgg aaaacgttct
     6661 tcggggcgaa aactctcaag gatcttaccg ctgttgagat ccagttcgat gtaacccact
     6721 cgtgcaccca actgatcttc agcatctttt actttcacca gcgtttctgg gtgagcaaaa
     6781 acaggaaggc aaaatgccgc aaaaaaggga ataagggcga cacggaaatg ttgaatactc
     6841 atactcttcc tttttcaata ttattgaagc atttatcagg gttattgtct catgagcgga
     6901 tacatatttg aatgtattta gaaaaataaa caaatagggg ttccgcgcac atttccccga
     6961 aaagtgccac ctgacgtcta agaaaccatt attatcatga cattaaccta taaaaatagg
     7021 cgtatcacga ggcagaattt cagataaaaa aaatccttag ctttcgctaa ggatgatttc
     7081 tggaattcgc ggccgcttct agaa
//
