LOCUS       pBEST-PT7-MGapt-        3221 bp    DNA     circular UNA 24-SEP-2024
DEFINITION  originally pDSG028 fixed.
ACCESSION   urn.local.zoila.o-i8vw88i
VERSION     urn.local.zoila.o-i8vw88i
KEYWORDS    .
SOURCE      
  ORGANISM  .
FEATURES             Location/Qualifiers
     primer_bind     991..1012
                     /Sequence="AAAAAGGGAATAAGGGCGACAC"
                     /Hairpin_Tm="None"
                     /Tm="59.2"
                     /Self_Dimer_Tm="None"
                     /%GC="45.5"
                     /created_by="primer3"
                     /note="Derived using Geneious Prime 2024.0.7 'Annotate
                     from Database' based on nucleotide similarity"
                     /Transferred_From="ASS_Carb.REV"
                     /Transferred_Similarity="100.00%"
                     /Primary_Match="100.00%; Adjusted-Interval-0:0/0; Carb.REV
                     (ASS_Carb.REV)"
                     /label="Carb.REV"
     promoter        complement(1032..1136)
                     /note="pLannotate"
                     /database="addgene"
                     /identity="100.0"
                     /match_length="100.0"
                     /fragment="False"
                     /other="promoter"
                     /note="Derived using Geneious Prime 2024.0.7 'Annotate
                     from Database' based on nucleotide similarity"
                     /Transferred_From="georgs_sample_05"
                     /Transferred_Similarity="100.00%"
                     /Primary_Match="100.00%; Adjusted-Interval-0:0/0; AmpR
                     promoter (<a
                     href=""urn:local:andrey:v-e669fd0"">georgs_sample_05</a>)"
                     /Alternative_Match="100.00%; Adjusted-Interval-0:33/-2;
                     AmpR promoter (AmpR_promoter_(4))"
                     /label="AmpR promoter"
     promoter        1490..1508
                     /Color="#ffffff"
                     /note="Derived using Geneious Prime 2024.0.7 'Annotate
                     from Database' based on nucleotide similarity"
                     /Transferred_From="T7_promoter"
                     /Transferred_Similarity="100.00%"
                     /Primary_Match="100.00%; Adjusted-Interval-0:0/0; T7
                     promoter (T7_promoter)"
                     /label="T7 promoter"
     misc_RNA        1517..1554
                     /created_by="User"
                     /modified_by="User"
                     /X-Transferred_From="C21m"
                     /X-Transferred_Similarity="100.00%"
                     /note="Derived using Geneious Prime 2024.0.7 'Annotate
                     from Database' based on nucleotide similarity"
                     /Transferred_From="MG Aptamer"
                     /Transferred_Similarity="100.00%"
                     /Primary_Match="100.00%; Adjusted-Interval-0:0/0; <a
                     href=""urn:local:Andrey:kw-9d544za"">MG Aptamer</a>"
                     /label="MG Aptamer"
     RBS             1555..1587
                     /note="UTR1"
                     /Color="#cc0000"
                     /modified_by="Andrey"
                     /note="Derived using Geneious Prime 2024.0.7 'Annotate
                     from Database' based on nucleotide similarity"
                     /Transferred_From="U4m - UTR1"
                     /Transferred_Similarity="100.00%"
                     /Primary_Match="100.00%; Adjusted-Interval-0:0/0; UTR1
                     (U4m - UTR1)"
                     /label="UTR1"
     CDS             1590..2267
                     /Color="#00ff00"
                     /Transferred_Translation="MELFTGVVPILVELDGDVNGHKFSVSGEGEGD
                     ATYGKLTLKFICTTGKLPVPWPTLVTTLTYGVQCFSRYPDHMKQHDFFKSAMPEGYVQ
                     ERTIFFKDDGNYKTRAEVKFEGDTLVNRIELKGIDFKEDGNILGHKLEYNYNSHNVYI
                     MADKQKNGIKVNFKIRHNIEDGSVQLADHYQQNTPIGDGPVLLPDNHYLSTQSALSKD
                     PNEKRDHMVLLEFVTAAGI"
                     /note="Derived using Geneious Prime 2024.0.7 'Annotate
                     from Database' based on nucleotide similarity"
                     /Transferred_From="deGFP"
                     /Transferred_Similarity="100.00%"
                     /Primary_Match="100.00%; Adjusted-Interval-0:0/0; deGFP"
                     /Alternative_Match="100.00%; Adjusted-Interval-0:0/3;
                     deGFP (<a href=""urn:local:Andrey:4x-9d506q0"">deGFP -
                     deGFP translation</a>)"
                     /Alternative_Match="100.00%; Adjusted-Interval-0:0/3;
                     deGFP (<a href=""urn:local:Andrey:bh-9d50mvr"">C1m - deGFP
                     translation</a>)"
                     /label="deGFP"
     terminator      2274..2321
                     /Color="#ffffff"
                     /note="Derived using Geneious Prime 2024.0.7 'Annotate
                     from Database' based on nucleotide similarity"
                     /Transferred_From="T7_terminator"
                     /Transferred_Similarity="100.00%"
                     /Primary_Match="100.00%; Adjusted-Interval-0:0/0; T7
                     terminator (T7_terminator)"
                     /label="T7 terminator"
     primer_bind     complement(2512..2532)
                     /Sequence="TTACCGCCTTTGAGTGAGCTG"
                     /Hairpin_Tm="None"
                     /Tm="60.6"
                     /Self_Dimer_Tm="None"
                     /%GC="52.4"
                     /created_by="primer3"
                     /modified_by="andrey"
                     /note="Derived using Geneious Prime 2024.0.7 'Annotate
                     from Database' based on nucleotide similarity"
                     /Transferred_From="Part.Seq.REV"
                     /Transferred_Similarity="100.00%"
                     /Primary_Match="100.00%; Adjusted-Interval-0:0/0;
                     Part.Seq.REV"
                     /label="Part.Seq.REV"
     rep_origin      complement(2604..3221)
                     /direction="RIGHT"
                     /note="color: #ffff00; high-copy-number
                     ColE1/pMB1/pBR322/pUC origin of  replication"
                     /X-Transferred_From="ori"
                     /X-Transferred_Similarity="99.83%"
                     /modified_by="Andrey"
                     /note="Derived using Geneious Prime 2024.0.7 'Annotate
                     from Database' based on nucleotide similarity"
                     /Transferred_From="pUC High Copy Cole1 ori"
                     /Transferred_Similarity="100.00%"
                     /Primary_Match="100.00%; Adjusted-Interval-0:0/0; pUC high
                     copy ori (<a href=""urn:local:Andrey:5z-8qadjwf"">pUC High
                     Copy Cole1 ori</a>)"
                     /Alternative_Match="100.00%; Adjusted-Interval-0:0/-29;
                     ori (<a
                     href=""urn:local:andrey:v-e669fd0"">georgs_sample_05</a>)"
                     /label="pUC high copy ori"
     partial         complement(2604..3182)
                     /direction="RIGHT"
                     /note="color: #ffff99"
                     /Color="#50b3ff"
                     /modified_by="Andrey"
                     /note="Derived using Geneious Prime 2024.0.7 'Annotate
                     from Database' based on nucleotide similarity"
                     /Transferred_From="Cole1_no_promoter"
                     /Transferred_Similarity="100.00%"
                     /Primary_Match="100.00%; Adjusted-Interval-0:0/0; Cole1 no
                     promoter (Cole1_no_promoter)"
                     /label="Cole1 no promoter"
     primer_bind     complement(2693..2711)
                     /Sequence="TAGTCCTGTCGGGTTTCGC"
                     /Hairpin_Tm="39.1"
                     /Tm="59.4"
                     /Self_Dimer_Tm="None"
                     /%GC="57.9"
                     /created_by="primer3"
                     /note="Derived using Geneious Prime 2024.0.7 'Annotate
                     from Database' based on nucleotide similarity"
                     /Transferred_From="ASS_Cole1.FOR"
                     /Transferred_Similarity="100.00%"
                     /Primary_Match="100.00%; Adjusted-Interval-0:0/0;
                     Cole1.FOR (ASS_Cole1.FOR)"
                     /label="Cole1.FOR"
     primer_bind     2990..3011
                     /Sequence="TGGTAACAGGATTAGCAGAGCG"
                     /%GC="50.0"
                     /note="Derived using Geneious Prime 2024.0.7 'Annotate
                     from Database' based on nucleotide similarity"
                     /Transferred_From="ASS_mc1chk.cole1.REV"
                     /Transferred_Similarity="100.00%"
                     /Primary_Match="100.00%; Adjusted-Interval-0:0/0; <a
                     href=""urn:local:Andrey:97-96u8sfk"">ASS_mc1chk.cole1.REV<
                     /a>"
                     /label="ASS_mc1chk.cole1.REV"
     promoter        3039..3068
                     /Color="#ffffff"
                     /note="Derived using Geneious Prime 2024.0.7 'Annotate
                     from Database' based on nucleotide similarity"
                     /Transferred_From="RNA_I_promoter"
                     /Transferred_Similarity="100.00%"
                     /Primary_Match="100.00%; Adjusted-Interval-0:0/0; RNA I
                     promoter (<a
                     href=""urn:local:Andrey:2a-9u4e0yq"">RNA_I_promoter</a>)"
                     /label="RNA I promoter"
     promoter        complement(3193..3221)
                     /Color="#ffffff"
                     /note="Derived using Geneious Prime 2024.0.7 'Annotate
                     from Database' based on nucleotide similarity"
                     /Transferred_From="RNAII_promoter"
                     /Transferred_Similarity="100.00%"
                     /Primary_Match="100.00%; Adjusted-Interval-0:0/0; RNAII
                     promoter (<a
                     href=""urn:local:Andrey:2g-9u4e0zb"">RNAII_promoter</a>)"
                     /label="RNAII promoter"
ORIGIN      
        1 gaagatcctt tgatcttttc tacggggtct gacgctcagt ggaacgaaaa ctcacgttaa
       61 gggattttgg tcatgagatt atcaaaaagg atcttcacct agatcctttt aaattaaaaa
      121 tgaagtttta aatcaatcta aagtatatat gagtaaactt ggtctgacag ttaccaatgc
      181 ttaatcagtg aggcacctat ctcagcgatc tgtctatttc gttcatccat agttgcctga
      241 ctccccgtcg tgtagataac tacgatacgg gagggcttac catctggccc cagtgctgca
      301 atgataccgc gagacccacg ctcaccggct ccagatttat cagcaataaa ccagccagcc
      361 ggaagggccg agcgcagaag tggtcctgca actttatccg cctccatcca gtctattaat
      421 tgttgccggg aagctagagt aagtagttcg ccagttaata gtttgcgcaa cgttgttgcc
      481 attgctacag gcatcgtggt gtcacgctcg tcgtttggta tggcttcatt cagctccggt
      541 tcccaacgat caaggcgagt tacatgatcc cccatgttgt gcaaaaaagc ggttagctcc
      601 ttcggtcctc cgatcgttgt cagaagtaag ttggccgcag tgttatcact catggttatg
      661 gcagcactgc ataattctct tactgtcatg ccatccgtaa gatgcttttc tgtgactggt
      721 gagtactcaa ccaagtcatt ctgagaatag tgtatgcggc gaccgagttg ctcttgcccg
      781 gcgtcaacac gggataatac cgcgccacat agcagaactt taaaagtgct catcattgga
      841 aaacgttctt cggggcgaaa actctcaagg atcttaccgc tgttgagatc cagttcgatg
      901 taacccactc gtgcacccaa ctgatcttca gcatctttta ctttcaccag cgtttctggg
      961 tgagcaaaaa caggaaggca aaatgccgca aaaaagggaa taagggcgac acggaaatgt
     1021 tgaatactca tactcttcct ttttcaatat tattgaagca tttatcaggg ttattgtctc
     1081 atgagcggat acatatttga atgtatttag aaaaataaac aaataggggt tccgcgcaca
     1141 tttccccgaa aagtgccacc tgacgtctaa gaaaccatta ttatcatgac attaacctat
     1201 aaaaataggc gtatcacgag gccctttcgt cttcaagaat tctggcgaat cctctgacca
     1261 gccagaaaac gacctttctg tggtgaaacc ggatgctgca attcagagcg ccagcaagtg
     1321 ggggacagca gaagacctga ccgccgcaga gtggatgttt gacatggtga agactatcgc
     1381 accatcagcc agaaaaccga attttgctgg gtgggctaac gatatccgcg gatcccgact
     1441 gatgcgtgaa cgtgacggac gtaaccaccg cgacatgtgt gtgctgttct aatacgactc
     1501 actatagggg ctagcgggat cccgactggc gagagccagg taacgaatgg atccaataat
     1561 tttgtttaac tttaagaagg agatatacca tggagctttt cactggcgtt gttcccatcc
     1621 tggtcgagct ggacggcgac gtaaacggcc acaagttcag cgtgtccggc gagggcgagg
     1681 gcgatgccac ctacggcaag ctgaccctga agttcatctg caccaccggc aagctgcccg
     1741 tgccctggcc caccctcgtg accaccctga cctacggcgt gcagtgcttc agccgctacc
     1801 ccgaccacat gaagcagcac gacttcttca agtccgccat gcccgaaggc tacgtccagg
     1861 agcgcaccat cttcttcaag gacgacggca actacaagac ccgcgccgag gtgaagttcg
     1921 agggcgacac cctggtgaac cgcatcgagc tgaagggcat cgacttcaag gaggacggca
     1981 acatcctggg gcacaagctg gagtacaact acaacagcca caacgtctat atcatggccg
     2041 acaagcagaa gaacggcatc aaggtgaact tcaagatccg ccacaacatc gaggacggca
     2101 gcgtgcagct cgccgaccac taccagcaga acacccccat cggcgacggc cccgtgctgc
     2161 tgcccgacaa ccactacctg agcacccagt ccgccctgag caaagacccc aacgagaagc
     2221 gcgatcacat ggtcctgctg gagttcgtga ccgccgccgg gatctaactc gagctagcat
     2281 aaccccttgg ggcctctaaa cgggtcttga ggggtttttt ggtcgaccga tgcccttgag
     2341 agccttcaac ccagtcagct ccttccggtg ggcgcggggc atgactatcg tcgccgcact
     2401 tatgactgtc ttctttatca tgcaactcgt aggacaggtg ccggcagcgc tcttccgctt
     2461 cctcgctcac tgactcgctg cgctcggtcg ttcggctgcg gcgagcggta tcagctcact
     2521 caaaggcggt aatacggtta tccacagaat caggggataa cgcaggaaag aacatgtgag
     2581 caaaaggcca gcaaaaggcc aggaaccgta aaaaggccgc gttgctggcg tttttccata
     2641 ggctccgccc ccctgacgag catcacaaaa atcgacgctc aagtcagagg tggcgaaacc
     2701 cgacaggact ataaagatac caggcgtttc cccctggaag ctccctcgtg cgctctcctg
     2761 ttccgaccct gccgcttacc ggatacctgt ccgcctttct cccttcggga agcgtggcgc
     2821 tttctcatag ctcacgctgt aggtatctca gttcggtgta ggtcgttcgc tccaagctgg
     2881 gctgtgtgca cgaacccccc gttcagcccg accgctgcgc cttatccggt aactatcgtc
     2941 ttgagtccaa cccggtaaga cacgacttat cgccactggc agcagccact ggtaacagga
     3001 ttagcagagc gaggtatgta ggcggtgcta cagagttctt gaagtggtgg cctaactacg
     3061 gctacactag aagaacagta tttggtatct gcgctctgct gaagccagtt accttcggaa
     3121 aaagagttgg tagctcttga tccggcaaac aaaccaccgc tggtagcggt ggtttttttg
     3181 tttgcaagca gcagattacg cgcagaaaaa aaggatctca a
//
