LOCUS       pEGFP-MBD2∆C∆GR_pc5086  5383 bp ds-DNA     circular     07-MAY-2025
DEFINITION  .
KEYWORDS    "marker:NeoR/KanR, MBD2∆C∆GR"
COMMENT     Annotated with pLannotate v1.2.1
FEATURES             Location/Qualifiers
     rep_origin      1..589
                     /label="ori"
                     /ApEinfo_revcolor="#ffff00"
                     /ApEinfo_fwdcolor="#ffff00"
                     /note="label: ori note: pLannotate note: /database=snapgene note: /fragment=False note: /identity=99.8 note: /match_length=100.0 note: /other=rep_origin"
     enhancer        764..1067
                     /label="CMV enhancer"
                     /ApEinfo_revcolor="#b4abac"
                     /ApEinfo_fwdcolor="#b4abac"
                     /note="label: CMV enhancer note: pLannotate note: /database=snapgene note: /fragment=False note: /identity=100.0 note: /match_length=100.0 note: /other=enhancer"
     promoter        1068..1271
                     /label="CMV promoter"
                     /ApEinfo_revcolor="#b7e6d7"
                     /ApEinfo_fwdcolor="#b7e6d7"
                     /note="label: CMV promoter note: pLannotate note: /database=snapgene note: /fragment=False note: /identity=100.0 note: /match_length=100.0 note: /other=promoter"
     misc_feature    1294..1337
                     /label="MCS (fragment)"
                     /ApEinfo_revcolor="#b4abac"
                     /ApEinfo_fwdcolor="#b4abac"
                     /note="label: MCS (fragment) note: pLannotate note: /database=snapgene note: /fragment=True note: /identity=100.0 note: /match_length=54.3 note: /other=misc_feature"
     CDS             1357..2004
                     /label="MBD2∆C∆GR"
                     /ApEinfo_revcolor="#ff6600"
                     /ApEinfo_fwdcolor="#ff6600"
                     /note="codon_start: 1 label: MBD2 (fragment) note: pLannotate note: /database=swissprot note: /fragment=True note: /identity=83.6 note: /match_length=52.6 note: /other=CDS transl_table: 1 translation: MRAHPGGGRCCPEQEEGESAAGGSGAGGDSAIEQGGQGSALAPSPVSGVRREGARGGGRGRGRWKQAARGGGVCPQSGGSGLGGDGGGGAGGCGVGSGGGVAPRRDPVPFPSGSSGPGPRGPRATESGKRMDCPALPPGWKKEEVIRKSGLSAGKSDVYYFSPSGKKFRSKPQLARYLGNAVDLSSFDFRTGKMMPSKLQKNKQRLRNDPLNQVDG"
     CDS             2032..2751
                     /label="EGFP"
                     /ApEinfo_revcolor="#993366"
                     /ApEinfo_fwdcolor="#993366"
                     /note="codon_start: 1 label: EGFP note: pLannotate note: /database=snapgene note: /fragment=False note: /identity=100.0 note: /match_length=100.0 note: /other=CDS transl_table: 1 translation: MVSKGEELFTGVVPILVELDGDVNGHKFSVSGEGEGDATYGKLTLKFICTTGKLPVPWPTLVTTLTYGVQCFSRYPDHMKQHDFFKSAMPEGYVQERTIFFKDDGNYKTRAEVKFEGDTLVNRIELKGIDFKEDGNILGHKLEYNYNSHNVYIMADKQKNGIKVNFKIRHNIEDGSVQLADHYQQNTPIGDGPVLLPDNHYLSTQSALSKDPNEKRDHMVLLEFVTAAGITLGMDELYK*"
     CDS             2768..2851
                     /label="large T antigen (fragment)"
                     /ApEinfo_revcolor="#993366"
                     /ApEinfo_fwdcolor="#993366"
                     /note="codon_start: 1 label: large T antigen (fragment) note: pLannotate note: /database=snapgene note: /fragment=True note: /identity=100.0 note: /match_length=3.9 note: /other=CDS transl_table: 1 translation: DHNQPYHICRGFTCFKKPPTPPPEPET*"
     polyA_signal    2874..2995
                     /label="SV40 poly(A) signal"
                     /ApEinfo_revcolor="#b4abac"
                     /ApEinfo_fwdcolor="#b4abac"
                     /note="label: SV40 poly(A) signal note: pLannotate note: /database=snapgene note: /fragment=False note: /identity=100.0 note: /match_length=100.0 note: /other=polyA_signal"
     rep_origin      complement(3029..3457)
                     /label="f1 ori"
                     /ApEinfo_revcolor="#ffff00"
                     /ApEinfo_fwdcolor="#ffff00"
                     /note="direction: LEFT label: f1 ori note: pLannotate note: /database=snapgene note: /fragment=False note: /identity=100.0 note: /match_length=100.0 note: /other=rep_origin"
     promoter        3484..3588
                     /label="AmpR promoter"
                     /ApEinfo_revcolor="#b7e6d7"
                     /ApEinfo_fwdcolor="#b7e6d7"
                     /note="label: AmpR promoter note: pLannotate note: /database=snapgene note: /fragment=False note: /identity=100.0 note: /match_length=100.0 note: /other=promoter"
     promoter        3590..3947
                     /label="SV40 promoter"
                     /ApEinfo_revcolor="#b7e6d7"
                     /ApEinfo_fwdcolor="#b7e6d7"
                     /note="label: SV40 promoter note: pLannotate note: /database=snapgene note: /fragment=False note: /identity=100.0 note: /match_length=100.0 note: /other=promoter"
     CDS             3982..4776
                     /label="NeoR/KanR"
                     /ApEinfo_revcolor="#b7e6d7"
                     /ApEinfo_fwdcolor="#b7e6d7"
                     /note="codon_start: 1 label: NeoR/KanR note: pLannotate note: /database=snapgene note: /fragment=False note: /identity=100.0 note: /match_length=100.0 note: /other=CDS transl_table: 1 translation: MIEQDGLHAGSPAAWVERLFGYDWAQQTIGCSDAAVFRLSAQGRPVLFVKTDLSGALNELQDEAARLSWLATTGVPCAAVLDVVTEAGRDWLLLGEVPGQDLLSSHLAPAEKVSIMADAMRRLHTLDPATCPFDHQAKHRIERARTRMEAGLVDQDDLDEEHQGLAPAELFARLKASMPDGEDLVVTHGDACLPNIMVENGRFSGFIDCGRLGVADRYQDIALATRDIAEELGGEWADRFLVLYGIAAPDSQRIAFYRLLDEFF*"
     CDS             4797..4949
                     /label="ble (fragment)"
                     /ApEinfo_revcolor="#993366"
                     /ApEinfo_fwdcolor="#993366"
                     /note="codon_start: 1 label: ble (fragment) note: pLannotate note: /database=swissprot note: /fragment=True note: /identity=100.0 note: /match_length=40.5 note: /other=CDS transl_table: 1 translation: MTDQATPNLPSRDFDSTAAFYERLGFGIVFRDAGWMILQRGDLMLEFFAHP"
     polyA_signal    5008..5055
                     /label="HSV TK poly(A) signal"
                     /ApEinfo_revcolor="#b4abac"
                     /ApEinfo_fwdcolor="#b4abac"
                     /note="label: HSV TK poly(A) signal note: pLannotate note: /database=snapgene note: /fragment=False note: /identity=98.0 note: /match_length=100.0 note: /other=polyA_signal"
     polyA_signal    complement(5146..5162)
                     /label="bGH poly(A) signal (fragment)"
                     /ApEinfo_revcolor="#b4abac"
                     /ApEinfo_fwdcolor="#b4abac"
                     /note="label: bGH poly(A) signal (fragment) note: pLannotate note: /database=snapgene note: /fragment=True note: /identity=100.0 note: /match_length=8.2 note: /other=polyA_signal"
ORIGIN
        1 ttgagatcct ttttttctgc gcgtaatctg ctgcttgcaa acaaaaaaac caccgctacc
       61 agcggtggtt tgtttgccgg atcaagagct accaactctt tttccgaagg taactggctt
      121 cagcagagcg cagataccaa atactgttct tctagtgtag ccgtagttag gccaccactt
      181 caagaactct gtagcaccgc ctacatacct cgctctgcta atcctgttac cagtggctgc
      241 tgccagtggc gataagtcgt gtcttaccgg gttggactca agacgatagt taccggataa
      301 ggcgcagcgg tcgggctgaa cggggggttc gtgcacacag cccagcttgg agcgaacgac
      361 ctacaccgaa ctgagatacc tacagcgtga gctatgagaa agcgccacgc ttcccgaagg
      421 gagaaaggcg gacaggtatc cggtaagcgg cagggtcgga acaggagagc gcacgaggga
      481 gcttccaggg ggaaacgcct ggtatcttta tagtcctgtc gggtttcgcc acctctgact
      541 tgagcgtcga tttttgtgat gctcgtcagg ggggcggagc ctatggaaaa acgccagcaa
      601 cgcggccttt ttacggttcc tggccttttg ctggcctttt gctcacatgt tctttcctgc
      661 gttatcccct gattctgtgg ataaccgtat taccgccatg cattagttat taatagtaat
      721 caattacggg gtcattagtt catagcccat atatggagtt ccgcgttaca taacttacgg
      781 taaatggccc gcctggctga ccgcccaacg acccccgccc attgacgtca ataatgacgt
      841 atgttcccat agtaacgcca atagggactt tccattgacg tcaatgggtg gagtatttac
      901 ggtaaactgc ccacttggca gtacatcaag tgtatcatat gccaagtacg ccccctattg
      961 acgtcaatga cggtaaatgg cccgcctggc attatgccca gtacatgacc ttatgggact
     1021 ttcctacttg gcagtacatc tacgtattag tcatcgctat taccatggtg atgcggtttt
     1081 ggcagtacat caatgggcgt ggatagcggt ttgactcacg gggatttcca agtctccacc
     1141 ccattgacgt caatgggagt ttgttttggc accaaaatca acgggacttt ccaaaatgtc
     1201 gtaacaactc cgccccattg acgcaaatgg gcggtaggcg tgtacggtgg gaggtctata
     1261 taagcagagc tggtttagtg aaccgtcaga tccgctagcg ctaccggact cagatctcga
     1321 gctcaagctt cgaattcaaa ggcctacgtc gacgccatgc gcgcgcaccc ggggggaggc
     1381 cgctgctgcc cggagcagga ggagggggag agcgcggcgg gcggcagcgg cgctggcggc
     1441 gactccgcca tagagcaggg gggccagggc agcgcgctcg ctccgtcccc ggtgagcggc
     1501 gtgcgcaggg aaggcgctcg gggcggcggc cgtggccggg ggcggtggaa gcaggcggcc
     1561 cggggcggcg gcgtctgtcc ccagagtggc ggcagcggcc ttggcggcga cggcggcggc
     1621 ggcgcgggcg gctgcggcgt cggcagcggt ggcggcgtcg ccccccggcg ggatcctgtc
     1681 cctttcccgt cggggagctc ggggccgggg cccaggggac cccgggccac ggagagcggg
     1741 aagaggatgg actgcccggc cctccccccc ggatggaaga aggaggaagt gatccgaaaa
     1801 tcagggctca gtgctggcaa gagcgatgtc tactacttca gtccaagtgg taagaagttc
     1861 agaagtaaac ctcagctggc aagatacctg ggaaatgctg ttgaccttag cagttttgac
     1921 ttcaggaccg gcaagatgat gcctagtaaa ttacagaaga acaagcagag actccggaat
     1981 gaccccctca atcaggtcga cggtaccgcg ggcccgggat ccatcgccac catggtgagc
     2041 aagggcgagg agctgttcac cggggtggtg cccatcctgg tcgagctgga cggcgacgta
     2101 aacggccaca agttcagcgt gtccggcgag ggcgagggcg atgccaccta cggcaagctg
     2161 accctgaagt tcatctgcac caccggcaag ctgcccgtgc cctggcccac cctcgtgacc
     2221 accctgacct acggcgtgca gtgcttcagc cgctaccccg accacatgaa gcagcacgac
     2281 ttcttcaagt ccgccatgcc cgaaggctac gtccaggagc gcaccatctt cttcaaggac
     2341 gacggcaact acaagacccg cgccgaggtg aagttcgagg gcgacaccct ggtgaaccgc
     2401 atcgagctga agggcatcga cttcaaggag gacggcaaca tcctggggca caagctggag
     2461 tacaactaca acagccacaa cgtctatatc atggccgaca agcagaagaa cggcatcaag
     2521 gtgaacttca agatccgcca caacatcgag gacggcagcg tgcagctcgc cgaccactac
     2581 cagcagaaca cccccatcgg cgacggcccc gtgctgctgc ccgacaacca ctacctgagc
     2641 acccagtccg ccctgagcaa agaccccaac gagaagcgcg atcacatggt cctgctggag
     2701 ttcgtgaccg ccgccgggat cactctcggc atggacgagc tgtacaagta aagcggccgc
     2761 gactctagat cataatcagc cataccacat ttgtagaggt tttacttgct ttaaaaaacc
     2821 tcccacacct ccccctgaac ctgaaacata aaatgaatgc aattgttgtt gttaacttgt
     2881 ttattgcagc ttataatggt tacaaataaa gcaatagcat cacaaatttc acaaataaag
     2941 catttttttc actgcattct agttgtggtt tgtccaaact catcaatgta tcttaaggcg
     3001 taaattgtaa gcgttaatat tttgttaaaa ttcgcgttaa atttttgtta aatcagctca
     3061 ttttttaacc aataggccga aatcggcaaa atcccttata aatcaaaaga atagaccgag
     3121 atagggttga gtgttgttcc agtttggaac aagagtccac tattaaagaa cgtggactcc
     3181 aacgtcaaag ggcgaaaaac cgtctatcag ggcgatggcc cactacgtga accatcaccc
     3241 taatcaagtt ttttggggtc gaggtgccgt aaagcactaa atcggaaccc taaagggagc
     3301 ccccgattta gagcttgacg gggaaagccg gcgaacgtgg cgagaaagga agggaagaaa
     3361 gcgaaaggag cgggcgctag ggcgctggca agtgtagcgg tcacgctgcg cgtaaccacc
     3421 acacccgccg cgcttaatgc gccgctacag ggcgcgtcag gtggcacttt tcggggaaat
     3481 gtgcgcggaa cccctatttg tttatttttc taaatacatt caaatatgta tccgctcatg
     3541 agacaataac cctgataaat gcttcaataa tattgaaaaa ggaagagtcc tgaggcggaa
     3601 agaaccagct gtggaatgtg tgtcagttag ggtgtggaaa gtccccaggc tccccagcag
     3661 gcagaagtat gcaaagcatg catctcaatt agtcagcaac caggtgtgga aagtccccag
     3721 gctccccagc aggcagaagt atgcaaagca tgcatctcaa ttagtcagca accatagtcc
     3781 cgcccctaac tccgcccatc ccgcccctaa ctccgcccag ttccgcccat tctccgcccc
     3841 atggctgact aatttttttt atttatgcag aggccgaggc cgcctcggcc tctgagctat
     3901 tccagaagta gtgaggaggc ttttttggag gcctaggctt ttgcaaagat cgatcaagag
     3961 acaggatgag gatcgtttcg catgattgaa caagatggat tgcacgcagg ttctccggcc
     4021 gcttgggtgg agaggctatt cggctatgac tgggcacaac agacaatcgg ctgctctgat
     4081 gccgccgtgt tccggctgtc agcgcagggg cgcccggttc tttttgtcaa gaccgacctg
     4141 tccggtgccc tgaatgaact gcaagacgag gcagcgcggc tatcgtggct ggccacgacg
     4201 ggcgttcctt gcgcagctgt gctcgacgtt gtcactgaag cgggaaggga ctggctgcta
     4261 ttgggcgaag tgccggggca ggatctcctg tcatctcacc ttgctcctgc cgagaaagta
     4321 tccatcatgg ctgatgcaat gcggcggctg catacgcttg atccggctac ctgcccattc
     4381 gaccaccaag cgaaacatcg catcgagcga gcacgtactc ggatggaagc cggtcttgtc
     4441 gatcaggatg atctggacga agagcatcag gggctcgcgc cagccgaact gttcgccagg
     4501 ctcaaggcga gcatgcccga cggcgaggat ctcgtcgtga cccatggcga tgcctgcttg
     4561 ccgaatatca tggtggaaaa tggccgcttt tctggattca tcgactgtgg ccggctgggt
     4621 gtggcggacc gctatcagga catagcgttg gctacccgtg atattgctga agagcttggc
     4681 ggcgaatggg ctgaccgctt cctcgtgctt tacggtatcg ccgctcccga ttcgcagcgc
     4741 atcgccttct atcgccttct tgacgagttc ttctgagcgg gactctgggg ttcgaaatga
     4801 ccgaccaagc gacgcccaac ctgccatcac gagatttcga ttccaccgcc gccttctatg
     4861 aaaggttggg cttcggaatc gttttccggg acgccggctg gatgatcctc cagcgcgggg
     4921 atctcatgct ggagttcttc gcccacccta gggggaggct aactgaaaca cggaaggaga
     4981 caataccgga aggaacccgc gctatgacgg caataaaaag acagaataaa acgcacggtg
     5041 ttgggtcgtt tgttcataaa cgcggggttc ggtcccaggg ctggcactct gtcgataccc
     5101 caccgagacc ccattggggc caatacgccc gcgtttcttc cttttcccca ccccaccccc
     5161 caagttcggg tgaaggccca gggctcgcag ccaacgtcgg ggcggcaggc cctgccatag
     5221 cctcaggtta ctcatatata ctttagattg atttaaaact tcatttttaa tttaaaagga
     5281 tctaggtgaa gatccttttt gataatctca tgaccaaaat cccttaacgt gagttttcgt
     5341 tccactgagc gtcagacccc gtagaaaaga tcaaaggatc ttc
//