LOCUS       .                       7297 bp    DNA     circular UNK 01-JAN-1980
DEFINITION  .
ACCESSION   <unknown id>
VERSION     <unknown id>
KEYWORDS    .
SOURCE      .
  ORGANISM  .
            .
FEATURES             Location/Qualifiers
     CDS             760..4437
                     /gene="TNRC6C"
                     /note="isoform 1 is encoded by transcript variant 1;
                     trinucleotide repeat-containing gene 6C protein;
                     trinucleotide repeat containing 6C"
                     /note="color: #993366"
                     /codon_start=1
                     /product="trinucleotide repeat-containing gene 6C protein
                     isoform 1"
                     /db_xref="{'GI': '2067168347', 'GeneID': '57690', 'HGNC':
                     'HGNC:29318', 'MIM': '610741'}"
                     /protein_id="NP_001136112.2"
                     /transl_table=1
                     /translation="EEKKKKKQEEKKKKEGAQKKAADQKTKVPEPTKTCSSQPQPAGTS
                     TSTSTSTISSSNNGKRASASGQQPAASRYLPREVPPRFRQQEQKQLLKRGQPLPTGTLT
                     SVSPTQGAGPAGVSPPPLPGAGTQHHPSKLQPDLSHSGLADHYENSHWGQQPTYRSEAN
                     CSWDKVIIDRTDKEAWPSITGTETESASECTTDTDSASNCGSENSSMATGSAQGNFTGH
                     TKKTNGNNGTNGALVQSPSNQSALGAGGANSNGSAARVWGVATGSSSGLAHCSVSGGDG
                     KMDTMIGDGRSQNCWGASNSNAGINLNLNPNANPAAWPVLGHEGTVATGNPSSICSPVS
                     AIGQNMGNQNGNPTGTLGAWGNLLPQESTEPQTSTSQNVSFSAQPQNLNTDGPNNTNPM
                     NSSPNPINAMQTNGLPNWGMAVGMGAIIPPHLQGLPGANGSSVSQVSGGSAEGISNSVW
                     GLSPGNPATGNSNSGFSQGNGDTVNSALSAKQNGSSSAVQKEGSGGNAWDSGPPAGPGI
                     LAWGRGSGNNGVGNIHSGAWGHPSRSTSNGVNGEWGKPPNQHSNSDINGKGSTGWESPS
                     VTSQNPTVQPGGEHMNSWAKAASSGTTASEGSSDGSGNHNEGSTGREGTGEGRRRDKGI
                     IDQGHIQLPRNDLDPRVLSNTGWGQTPVKQNTAWEFEESPRSERKNDNGTEAWGCAATQ
                     ASNSGGKNDGSIMNSTNTSSVSGWVNAPPAAVPANTGWGDSNNKAPSGPGVWGDSISST
                     AVSTAAAAKSGHAWSGAANQEDKSPTWGEPPKPKSQHWGDGQRSNPAWSAGGGDWADSS
                     SVLGHLGDGKKNGSGWDADSNRSGSGWNDTTRSGNSGWGNSTNTKANPGTNWGETLKPG
                     PQQNWASKPQDNNVSNWGGAASVKQTGTGWIGGPVPVKQKDSSEATGWEEPSPPSIRRK
                     MEIDDGTSAWGDPSNYNNKTVNMWDRNNPVIQSSTTTNTTTTTTTTTSNTTHRVETPPP
                     HQAGTQLNRSPLLGPVSSGWGEMPNVHSKTENSWGEPSSPSTLVDNGTAAWGKPPSSGS
                     GWGDHPAEPPVAFGRAGAPVAASALCKPASKSMQEGWGSGGDEMNLSTSQWEDEEGDVW
                     NNAASQESTSSCSSWGNAPKKGLQKGMKTSGKQDEAWIMSRLIKQLTDMGFPREPAEEA
                     LKSNNMNLDQAMSALLEKKVDVDKRGLGVTDHNGMAAKPLGCRPPISKESSVDRPTFLD
                     K"
                     /label="TNRC6C"
     CDS             5617..6477
                     /gene="bla"
                     /note="confers resistance to ampicillin, carbenicillin, and
                     related antibiotics"
                     /note="color: #ccffcc"
                     /codon_start=1
                     /product="β-lactamase"
                     /transl_table=1
                     /translation="MSIQHFRVALIPFFAAFCLPVFA,HPETLVKVKDAEDQLGARVGY
                     IELDLNSGKILESFRPEERFPMMSTFKVLLCGAVLSRIDAGQEQLGRRIHYSQNDLVEY
                     SPVTEKHLTDGMTVRELCSAAITMSDNTAANLLLTTIGGPKELTAFLHNMGDHVTRLDR
                     WEPELNEAIPNDERDTTMPVAMATTLRKLLTGELLTLASRQQLIDWMEADKVAGPLLRS
                     ALPAGWFIADKSGAGERGSRGIIAALGPDGKPSRIVVIYTTGSQATMDERNRQIAEIGA
                     SLIKHW*"
                     /label="AmpR"
     rep_origin      6648..7236
                     /note="high-copy-number ColE1/pMB1/pBR322/pUC origin of
                     replication"
                     /note="color: #ffff00"
                     /direction=RIGHT
                     /label="ori"
     promoter        169..711
                     /note="Chimeric promoter of ef1a and htlv 5' UTR"
                     /note="color: #ffffff"
                     /label="EF1α"
     rep_origin      4775..5230
                     /note="f1 bacteriophage origin of replication; arrow
                     indicates direction of (+) strand synthesis"
                     /note="color: #ffff00"
                     /direction=RIGHT
                     /label="f1 ori"
     repeat_region   1..141
                     /note="inverted terminal repeat of adeno-associated virus
                     serotype 2"
                     /note="color: #ffe4c4"
                     /rpt_type=inverted
                     /label="AAV2 ITR"
     repeat_region   4560..4700
                     /note="inverted terminal repeat of adeno-associated virus
                     serotype 2"
                     /note="color: #ffe4c4"
                     /rpt_type=inverted
                     /label="AAV2 ITR"
     promoter        5512..5616
                     /gene="bla"
                     /label="AmpR promoter"
                     /note="color: #ffffff"
     intron          4438..4478
                     /label="Splicing Donor"
                     /note="color: noColor"
     misc_feature    4482..4515
                     /label="lox2272-JT1571"
                     /note="color: #ff6600"
     CDS             727..753
                     /codon_start=1
                     /product="HA (human influenza hemagglutinin) epitope tag"
                     /transl_table=1
                     /translation="YPYDVPDYA"
                     /label="HA"
                     /note="color: #cc99b2"
ORIGIN
        1 cctgcaggca gctgcgcgct cgctcgctca ctgaggccgc ccgggcaaag cccgggcgtc
       61 gggcgacctt tggtcgcccg gcctcagtga gcgagcgagc gcgcagagag ggagtggcca
      121 actccatcac taggggttcc tgcggccgca cgcgtgtcga ctctagagga tctgcgatcg
      181 ctccggtgcc cgtcagtggg cagagcgcac atcgcccaca gtccccgaga agttgggggg
      241 aggggtcggc aattgaacgg gtgcctagag aaggtggcgc ggggtaaact gggaaagtga
      301 tgtcgtgtac tggctccgcc tttttcccga gggtggggga gaaccgtata taagtgcagt
      361 agtcgccgtg aacgttcttt ttcgcaacgg gtttgccgcc agaacacagc tgaagcttcg
      421 aggggctcgc atctctcctt cacgcgcccg ccgccctacc tgaggccgcc atccacgccg
      481 gttgagtcgc gttctgccgc ctcccgcctg tggtgcctcc tgaactgcgt ccgccgtcta
      541 ggtaagttta aagctcaggt cgagaccggg cctttgtccg gcgctccctt ggagcctacc
      601 tagactcagc cggctctcca cgctttgcct gaccctgctt gctcaactct acgtctttgt
      661 ttcgttttct gttctgcgcc gttacagatc caagctgtga ccggcgccta ccgtacggcc
      721 accatgtacc cttatgacgt acctgactat gctggatctg aagaaaagaa aaagaaaaag
      781 caggaagaaa agaaaaagaa ggaaggtgct cagaaaaagg ctgctgatca aaaaaccaaa
      841 gtgccagaac ctactaagac ctgttcaagc cagccccaac ctgccggtac cagtaccagt
      901 acttccacca gcactatctc aagcagcaac aatggcaaac gtgcatctgc cagtggccag
      961 cagccagctg catcccgtta cctgcctcgt gaggtgcctc cacgcttccg ccagcaagaa
     1021 cagaagcagc tattaaagag aggccagcca ttgcctacgg ggactctaac cagtgtgagc
     1081 ccaacccagg gtgctgggcc tgcaggggta agcccacctc ccctacctgg agccggaaca
     1141 cagcatcatc ccagtaagct ccaaccagat ctcagtcata gtggattggc agatcattat
     1201 gaaaattccc actggggaca gcagcctact tacagaagcg aagccaactg cagctgggat
     1261 aaagtgataa tagataggac tgacaaggag gcgtggcctt ccatcacagg aacagagact
     1321 gaatctgcct cagaatgtac tacagacact gactctgcct ccaactgtgg ctcagagaac
     1381 agtagcatgg ctacagggag tgcccagggc aacttcactg gacataccaa gaagacaaat
     1441 ggcaataatg gcaccaatgg cgcactcgtc caaagccctt ctaatcagag tgcccttgga
     1501 gcagggggag cgaacagtaa tggaagtgcg gccagagtgt ggggtgtagc cacaggctcc
     1561 agctctggcc tggctcactg ctctgtcagt ggtggggatg gaaaaatgga cactatgatt
     1621 ggagatggga gaagtcagaa ttgctggggt gcttccaact ccaatgctgg cattaatctt
     1681 aaccttaatc ctaatgccaa cccagctgcc tggcctgtac ttggacatga aggaaccgtg
     1741 gcgacaggca acccttccag tatttgcagt ccagtcagtg ccataggtca aaatatgggc
     1801 aaccagaacg ggaacccaac aggcacttta ggtgcttggg gaaacttgct gccacaagag
     1861 agcacagaac cacaaacgtc cacttctcag aatgtgtctt tcagcgcaca acctcagaac
     1921 cttaacactg atggaccaaa taacactaac cccatgaact cttcacccaa ccctatcaat
     1981 gcaatgcaga caaatggact gccaaactgg ggcatggctg ttggtatggg ggccatcatc
     2041 ccgccccacc tgcaaggcct tcctggtgct aatggatcat cagtttctca agtcagtggg
     2101 ggcagtgctg aaggaataag caattctgtg tggggactgt ccccaggtaa ccctgccaca
     2161 ggaaatagca attctgggtt cagtcagggg aatggagaca ctgtgaactc agcattaagt
     2221 gctaaacaaa atggatccag cagtgctgtg caaaaggaag gaagtggagg aaatgcttgg
     2281 gattcaggac ctcctgctgg tcctggaata ctcgcctggg gaaggggcag tggcaacaat
     2341 ggcgttggta atatccattc aggagcttgg ggccacccca gccgaagcac ctctaacggt
     2401 gtgaatgggg aatggggaaa gcccccaaac cagcattcca acagtgacat caatgggaaa
     2461 ggatcaacag ggtgggagag tcctagtgtc accagccaga accctaccgt acagcctggt
     2521 ggtgaacaca tgaactcctg ggccaaagcg gcatcttctg gaactacagc aagtgaagga
     2581 agtagtgatg gttctggcaa ccacaatgaa ggaagcactg ggagggaagg aacgggagaa
     2641 ggccgaaggc gagataaagg gattatagac caagggcaca tccagttgcc aaggaatgat
     2701 cttgacccaa gagttctgtc taatactggt tggggacaga ctcctgtaaa gcaaaacact
     2761 gcctgggaat ttgaagaatc ccctaggtct gaaaggaaaa atgacaatgg gacagaggcc
     2821 tggggttgtg cagctactca ggcttcaaac tcagggggga agaacgatgg gtccatcatg
     2881 aacagtacaa atacctcttc agtatctggg tgggtcaacg cgccacctgc cgctgtgcca
     2941 gcaaacacag gttggggaga cagcaacaac aaagcgccaa gtggcccggg ggtttggggg
     3001 gactcgataa gctctactgc tgttagtact gctgctgctg ccaagagtgg ccatgcttgg
     3061 agtggggccg caaatcagga ggacaagtca cccacctggg gtgagcctcc aaagcccaaa
     3121 tcccaacact ggggagatgg acaaagatca aatccagcct ggagtgcagg agggggagat
     3181 tgggcagatt catcgtctgt ccttggacac ttgggggatg ggaaaaaaaa tggatctgga
     3241 tgggatgctg acagtaatag gtcagggtct ggttggaatg acaccacgag atctgggaac
     3301 agtggctggg gcaacagcac aaatacaaag gccaatccag gtacaaactg gggggagact
     3361 ttaaaacctg gcccccaaca gaactgggct agcaaacccc aagacaacaa tgtgagtaac
     3421 tggggaggag ctgcttctgt gaaacagaca ggaacagggt ggatcggggg gccggtaccg
     3481 gtcaaacaga aggacagcag tgaagcaact ggctgggaag aaccctctcc accgtccatt
     3541 cgccgcaaaa tggaaattga tgatggtacc tcagcttggg gggacccaag caactataac
     3601 aataaaactg taaacatgtg ggatagaaac aacccggtca tccagagcag taccacgacc
     3661 aataccacca ccaccaccac cactaccacg agcaacacca cacacagggt cgagacgccg
     3721 cccccgcacc aggccggtac tcagctgaat cgatcaccgt tgcttggtcc agtttcatca
     3781 ggctggggag aaatgcctaa tgttcactca aagactgaaa actcttgggg agaaccatcc
     3841 tccccttcta ccctggtgga taatggcaca gcagcatggg ggaagccacc cagcagtggc
     3901 agcgggtggg gagatcaccc tgcagagccg ccggtggcat ttggaagagc tggcgcacct
     3961 gttgctgcct cagccctgtg caaaccagct tcaaaatcta tgcaagaagg ctggggcagt
     4021 ggtggggatg aaatgaacct cagtaccagc cagtgggagg atgaagaagg ggacgtgtgg
     4081 aataatgctg cttcccaaga aagcacctcc tcctgcagct cctgggggaa cgcccccaaa
     4141 aaaggacttc aaaagggcat gaagacgtct ggcaagcagg atgaggcctg gatcatgagc
     4201 cggctgatca aacaactcac agacatgggc ttcccgagag agccagctga ggaggccttg
     4261 aagagtaaca atatgaatct tgatcaggcc atgagcgctc tgctggaaaa gaaggtggac
     4321 gtggacaagc gtgggctggg agtgaccgac cataatggaa tggccgccaa gcccctcggc
     4381 tgccgcccgc caatctccaa agagtcttcc gtggaccgcc ccacctttct tgacaaggta
     4441 agtatcaagg ttacaagaca ggtttaagga gaccaataag ctattattcg tataggatac
     4501 tttatacgaa gttattaagt tatggagacc ggtgtggcac gtgcggaccg agcggccgca
     4561 ggaaccccta gtgatggagt tggccactcc ctctctgcgc gctcgctcgc tcactgaggc
     4621 cgggcgacca aaggtcgccc gacgcccggg ctttgcccgg gcggcctcag tgagcgagcg
     4681 agcgcgcagc tgcctgcagg ggcgcctgat gcggtatttt ctccttacgc atctgtgcgg
     4741 tatttcacac cgcatacgtc aaagcaacca tagtacgcgc cctgtagcgg cgcattaagc
     4801 gcggcgggtg tggtggttac gcgcagcgtg accgctacac ttgccagcgc cctagcgccc
     4861 gctcctttcg ctttcttccc ttcctttctc gccacgttcg ccggctttcc ccgtcaagct
     4921 ctaaatcggg ggctcccttt agggttccga tttagtgctt tacggcacct cgaccccaaa
     4981 aaacttgatt tgggtgatgg ttcacgtagt gggccatcgc cctgatagac ggtttttcgc
     5041 cctttgacgt tggagtccac gttctttaat agtggactct tgttccaaac tggaacaaca
     5101 ctcaacccta tctcgggcta ttcttttgat ttataaggga ttttgccgat ttcggcctat
     5161 tggttaaaaa atgagctgat ttaacaaaaa tttaacgcga attttaacaa aatattaacg
     5221 tttacaattt tatggtgcac tctcagtaca atctgctctg atgccgcata gttaagccag
     5281 ccccgacacc cgccaacacc cgctgacgcg ccctgacggg cttgtctgct cccggcatcc
     5341 gcttacagac aagctgtgac cgtctccggg agctgcatgt gtcagaggtt ttcaccgtca
     5401 tcaccgaaac gcgcgagacg aaagggcctc gtgatacgcc tatttttata ggttaatgtc
     5461 atgataataa tggtttctta gacgtcaggt ggcacttttc ggggaaatgt gcgcggaacc
     5521 cctatttgtt tatttttcta aatacattca aatatgtatc cgctcatgag acaataaccc
     5581 tgataaatgc ttcaataata ttgaaaaagg aagagtatga gtattcaaca tttccgtgtc
     5641 gcccttattc ccttttttgc ggcattttgc cttcctgttt ttgctcaccc agaaacgctg
     5701 gtgaaagtaa aagatgctga agatcagttg ggtgcacgag tgggttacat cgaactggat
     5761 ctcaacagcg gtaagatcct tgagagtttt cgccccgaag aacgttttcc aatgatgagc
     5821 acttttaaag ttctgctatg tggcgcggta ttatcccgta ttgacgccgg gcaagagcaa
     5881 ctcggtcgcc gcatacacta ttctcagaat gacttggttg agtactcacc agtcacagaa
     5941 aagcatctta cggatggcat gacagtaaga gaattatgca gtgctgccat aaccatgagt
     6001 gataacactg cggccaactt acttctgaca acgatcggag gaccgaagga gctaaccgct
     6061 tttttgcaca acatggggga tcatgtaact cgccttgatc gttgggaacc ggagctgaat
     6121 gaagccatac caaacgacga gcgtgacacc acgatgcctg tagcaatggc aacaacgttg
     6181 cgcaaactat taactggcga actacttact ctagcttccc ggcaacaatt aatagactgg
     6241 atggaggcgg ataaagttgc aggaccactt ctgcgctcgg cccttccggc tggctggttt
     6301 attgctgata aatctggagc cggtgagcgt gggtctcgcg gtatcattgc agcactgggg
     6361 ccagatggta agccctcccg tatcgtagtt atctacacga cggggagtca ggcaactatg
     6421 gatgaacgaa atagacagat cgctgagata ggtgcctcac tgattaagca ttggtaactg
     6481 tcagaccaag tttactcata tatactttag attgatttaa aacttcattt ttaatttaaa
     6541 aggatctagg tgaagatcct ttttgataat ctcatgacca aaatccctta acgtgagttt
     6601 tcgttccact gagcgtcaga ccccgtagaa aagatcaaag gatcttcttg agatcctttt
     6661 tttctgcgcg taatctgctg cttgcaaaca aaaaaaccac cgctaccagc ggtggtttgt
     6721 ttgccggatc aagagctacc aactcttttt ccgaaggtaa ctggcttcag cagagcgcag
     6781 ataccaaata ctgtccttct agtgtagccg tagttaggcc accacttcaa gaactctgta
     6841 gcaccgccta catacctcgc tctgctaatc ctgttaccag tggctgctgc cagtggcgat
     6901 aagtcgtgtc ttaccgggtt ggactcaaga cgatagttac cggataaggc gcagcggtcg
     6961 ggctgaacgg ggggttcgtg cacacagccc agcttggagc gaacgaccta caccgaactg
     7021 agatacctac agcgtgagct atgagaaagc gccacgcttc ccgaagggag aaaggcggac
     7081 aggtatccgg taagcggcag ggtcggaaca ggagagcgca cgagggagct tccaggggga
     7141 aacgcctggt atctttatag tcctgtcggg tttcgccacc tctgacttga gcgtcgattt
     7201 ttgtgatgct cgtcaggggg gcggagccta tggaaaaacg ccagcaacgc ggccttttta
     7261 cggttcctgg ccttttgctg gccttttgct cacatgt
//
