LOCUS       mCherry-PhoCl_AND_A-Spy 7515 bp ds-DNA     circular     04-SEP-2025
DEFINITION  BioX- A AND PhoCl-mCherry
COMMENT     Imported using the Genbank importer. File name: 8_BioX- A AND
            PhoCl-mCherry.gb http://www.genscript.com/ This file is created by
            GenScript ORIGDB|GenBank VNTNAME|U605RJYHG0-8,BioX- A AND
            PhoCl-mCherry| VNTAUTHORNAME|GenScript| https://pubs.rsc.org/en/con
            tent/articlelanding/2021/sc/d1sc01059j#cit5
FEATURES             Location/Qualifiers
     rep_origin      12..467
                     /label="f1 ori"
                     /note="f1 bacteriophage origin of replication; arrow indicates direction of (+) strand synthesis"
     CDS             complement(560..1375)
                     /label="KanR"
                     /note="confers resistance to kanamycin in bacteria or G418 (Geneticin(R)) in eukaryotes"
                     /gene="aph(3')-Ia"
                     /product="aminoglycoside phosphotransferase"
                     /translation="MSHIQRETSCSRPRLNSNMDADLYGYKWARDNVGQSGATIYRLYGKPDAPELFLKHGKGSVANDVTDEMVRLNWLTEFMPLPTIKHFIRTPDDAWLLTTAIPGKTAFQVLEEYPDSGENIVDALAVFLRRLHSIPVCNCPFNSDRVFRLAQAQSRMNNGLVDASDFDDERNGWPVEQVWKEMHKLLPFSPDSVVTHGDFSLDNLIFDEGKLIGCIDVGRVGIADRYQDLAILWNCLGEFSPSLQKRLFQKYGIDNPDMNKLQFHLMLDEFF*"
     rep_origin      1497..2085
                     /label="ori"
                     /note="high-copy-number ColE1/pMB1/pBR322/pUC origin of replication"
     misc_feature    2271..2413
                     /label="bom"
                     /note="basis of mobility region from pBR322"
     CDS             complement(2515..2706)
                     /label="rop"
                     /gene="rop"
                     /product="Rop protein, which maintains plasmids at low copy number"
                     /translation="VTKQEKTALNMARFIRSQTLTLLEKLNELDADEQADICESLHDHADELYRSCLARFGDDGENL*"
     protein_bind    complement(3481..3502)
                     /label="CAP binding site"
                     /note="CAP binding activates transcription in the presence of cAMP."
     CDS             complement(3515..4597)
                     /label="lacI"
                     /note="The lac repressor binds to the lac operator to inhibit transcription in E. coli. This inhibition can be relieved by adding lactose or isopropyl-beta-D-thiogalactopyranoside (IPTG)."
                     /gene="lacI"
                     /product="lac repressor"
                     /translation="VKPVTLYDVAEYAGVSYQTVSRVVNQASHVSAKTREKVEAAMAELNYIPNRVAQQLAGKQSLLIGVATSSLALHAPSQIVAAIKSRADQLGASVVVSMVERSGVEACKAAVHNLLAQRVSGLIINYPLDDQDAIAVEAACTNVPALFLDVSDQTPINSIIFSHEDGTRLGVEHLVALGHQQIALLAGPLSSVSARLRLAGWHKYLTRNQIQPIAEREGDWSAMSGFQQTMQMLNEGIVPTAMLVANDQMALGAMRAITESGLRVGADISVVGYDDTEDSSCYIPPLTTIKQDFRLLGQTSVDRLLQLSQGQAVKGNQLLPVSLVKRKTTLAPNTQTASPRALADSLMQLARQVSRLESGQ*"
     promoter        complement(4598..4675)
                     /label="lacIq promoter"
                     /note="In the lacIq allele, a single base change in the promoter boosts expression of the lacI gene about 10-fold."
                     /gene="lacI (mutant)"
     promoter        4988..5006
                     /label="T7 promoter"
                     /note="promoter for bacteriophage T7 RNA polymerase"
     protein_bind    5007..5031
                     /label="lac operator"
                     /note="The lac repressor binds to the lac operator to inhibit transcription in E. coli. This inhibition can be relieved by adding lactose or isopropyl-beta-D-thiogalactopyranoside (IPTG)."
     RBS             5046..5068
                     /label="efficient ribosome binding site from bacteriophage T7 gene 10 (Olins and Rangwala, 1989)"
     CDS             5076..7352
                     /translation="MGSSVKIISRKSLGTQNVYDIGVEKDHNFLLKNGLVASNCFNGGSGGSGGSGGSGGSGGSGGSGGSGGSVIPDYFKQSFPEGYSWERSMTYEDGGICIATNDITMEGDSFINKIHFQGTNFPPNGPVMQKRTVGWEASTEKMYERDGVLKGDVKMKLLLKGGGHYRGDYRTTYKVKQKPVKLPDCHFVDHRIEILSHDKDYNKVKLYEHAVAKTSTDSMDELYKGGSGGMVSKGEETITSVIKPDMKNKLRMEGNVNGHAFVIEGEGSGKPFEGIQTIDLEVKEGAPLPFAYDILTTAFHYGNRVFTKYPRGGSGGSGGSGGSGGSGGSGGSGGSGGSMVSKGEEDNMAIIKEFMRFKVHMEGSVNGHEFEIEGEGEGRPYEGTQTAKLKVTKGGPLPFAWDILSPQFMYGSKAYVKHPADIPDYLKLSFPEGFKWERVMNFEDGGVVTVTQDSSLQDGEFIYKVKLRGTNFPSDGPVMQKKTMGWEASSERMYPEDGALKGEIKQRLKLKDGGHYDAEVKTTYKAKKPVQLPGAYNVNIKLDITSHNEDYTIVEQYERAEGRHSTGGMDELYKGGSGGSGGSGGSGGSGGSLAETGGGSGGSGGSAHIVMVDAYKPTKGGSGGSGGSHHHHHHGGSGGSGGSAEYCLSYDTEILTVEYGFLPIGKIVEERIECTVYTVDKNGFVYTQPIAQWHNRGEQEVFEYCLEDGSIIRATKDHKFMTTDGQMLPIDEIFERGLDLKQVDGLPAANDENYALAA*"
     misc_feature    5283..6008
                     /label="PhoCl2c"
     misc_feature    5970..5975
                     /label="Cleavage site"
     misc_feature    6090..6797
                     /label="mCherry"
     misc_feature    6090..6797
                     /label="Insert Sequence"
     CDS             7359..7376
                     /label="6xHis"
                     /product="6xHis affinity tag"
                     /translation="HHHHHH"
     terminator      7443..7490
                     /label="T7 terminator"
                     /note="transcription terminator for bacteriophage T7 RNA polymerase"
ORIGIN
        1 tggcgaatgg gacgcgccct gtagcggcgc attaagcgcg gcgggtgtgg tggttacgcg
       61 cagcgtgacc gctacacttg ccagcgccct agcgcccgct cctttcgctt tcttcccttc
      121 ctttctcgcc acgttcgccg gctttccccg tcaagctcta aatcgggggc tccctttagg
      181 gttccgattt agtgctttac ggcacctcga ccccaaaaaa cttgattagg gtgatggttc
      241 acgtagtggg ccatcgccct gatagacggt ttttcgccct ttgacgttgg agtccacgtt
      301 ctttaatagt ggactcttgt tccaaactgg aacaacactc aaccctatct cggtctattc
      361 ttttgattta taagggattt tgccgatttc ggcctattgg ttaaaaaatg agctgattta
      421 acaaaaattt aacgcgaatt ttaacaaaat attaacgttt acaatttcag gtggcacttt
      481 tcggggaaat gtgcgcggaa cccctatttg tttatttttc taaatacatt caaatatgta
      541 tccgctcatg aattaattct tagaaaaact catcgagcat caaatgaaac tgcaatttat
      601 tcatatcagg attatcaata ccatattttt gaaaaagccg tttctgtaat gaaggagaaa
      661 actcaccgag gcagttccat aggatggcaa gatcctggta tcggtctgcg attccgactc
      721 gtccaacatc aatacaacct attaatttcc cctcgtcaaa aataaggtta tcaagtgaga
      781 aatcaccatg agtgacgact gaatccggtg agaatggcaa aagtttatgc atttctttcc
      841 agacttgttc aacaggccag ccattacgct cgtcatcaaa atcactcgca tcaaccaaac
      901 cgttattcat tcgtgattgc gcctgagcga gacgaaatac gcgatcgctg ttaaaaggac
      961 aattacaaac aggaatcgaa tgcaaccggc gcaggaacac tgccagcgca tcaacaatat
     1021 tttcacctga atcaggatat tcttctaata cctggaatgc tgttttcccg gggatcgcag
     1081 tggtgagtaa ccatgcatca tcaggagtac ggataaaatg cttgatggtc ggaagaggca
     1141 taaattccgt cagccagttt agtctgacca tctcatctgt aacatcattg gcaacgctac
     1201 ctttgccatg tttcagaaac aactctggcg catcgggctt cccatacaat cgatagattg
     1261 tcgcacctga ttgcccgaca ttatcgcgag cccatttata cccatataaa tcagcatcca
     1321 tgttggaatt taatcgcggc ctagagcaag acgtttcccg ttgaatatgg ctcataacac
     1381 cccttgtatt actgtttatg taagcagaca gttttattgt tcatgaccaa aatcccttaa
     1441 cgtgagtttt cgttccactg agcgtcagac cccgtagaaa agatcaaagg atcttcttga
     1501 gatccttttt ttctgcgcgt aatctgctgc ttgcaaacaa aaaaaccacc gctaccagcg
     1561 gtggtttgtt tgccggatca agagctacca actctttttc cgaaggtaac tggcttcagc
     1621 agagcgcaga taccaaatac tgtccttcta gtgtagccgt agttaggcca ccacttcaag
     1681 aactctgtag caccgcctac atacctcgct ctgctaatcc tgttaccagt ggctgctgcc
     1741 agtggcgata agtcgtgtct taccgggttg gactcaagac gatagttacc ggataaggcg
     1801 cagcggtcgg gctgaacggg gggttcgtgc acacagccca gcttggagcg aacgacctac
     1861 accgaactga gatacctaca gcgtgagcta tgagaaagcg ccacgcttcc cgaagggaga
     1921 aaggcggaca ggtatccggt aagcggcagg gtcggaacag gagagcgcac gagggagctt
     1981 ccagggggaa acgcctggta tctttatagt cctgtcgggt ttcgccacct ctgacttgag
     2041 cgtcgatttt tgtgatgctc gtcagggggg cggagcctat ggaaaaacgc cagcaacgcg
     2101 gcctttttac ggttcctggc cttttgctgg ccttttgctc acatgttctt tcctgcgtta
     2161 tcccctgatt ctgtggataa ccgtattacc gcctttgagt gagctgatac cgctcgccgc
     2221 agccgaacga ccgagcgcag cgagtcagtg agcgaggaag cggaagagcg cctgatgcgg
     2281 tattttctcc ttacgcatct gtgcggtatt tcacaccgca tatatggtgc actctcagta
     2341 caatctgctc tgatgccgca tagttaagcc agtatacact ccgctatcgc tacgtgactg
     2401 ggtcatggct gcgccccgac acccgccaac acccgctgac gcgccctgac gggcttgtct
     2461 gctcccggca tccgcttaca gacaagctgt gaccgtctcc gggagctgca tgtgtcagag
     2521 gttttcaccg tcatcaccga aacgcgcgag gcagctgcgg taaagctcat cagcgtggtc
     2581 gtgaagcgat tcacagatgt ctgcctgttc atccgcgtcc agctcgttga gtttctccag
     2641 aagcgttaat gtctggcttc tgataaagcg ggccatgtta agggcggttt tttcctgttt
     2701 ggtcactgat gcctccgtgt aagggggatt tctgttcatg ggggtaatga taccgatgaa
     2761 acgagagagg atgctcacga tacgggttac tgatgatgaa catgcccggt tactggaacg
     2821 ttgtgagggt aaacaactgg cggtatggat gcggcgggac cagagaaaaa tcactcaggg
     2881 tcaatgccag cgcttcgtta atacagatgt aggtgttcca cagggtagcc agcagcatcc
     2941 tgcgatgcag atccggaaca taatggtgca gggcgctgac ttccgcgttt ccagacttta
     3001 cgaaacacgg aaaccgaaga ccattcatgt tgttgctcag gtcgcagacg ttttgcagca
     3061 gcagtcgctt cacgttcgct cgcgtatcgg tgattcattc tgctaaccag taaggcaacc
     3121 ccgccagcct agccgggtcc tcaacgacag gagcacgatc atgcgcaccc gtggggccgc
     3181 catgccggcg ataatggcct gcttctcgcc gaaacgtttg gtggcgggac cagtgacgaa
     3241 ggcttgagcg agggcgtgca agattccgaa taccgcaagc gacaggccga tcatcgtcgc
     3301 gctccagcga aagcggtcct cgccgaaaat gacccagagc gctgccggca cctgtcctac
     3361 gagttgcatg ataaagaaga cagtcataag tgcggcgacg atagtcatgc cccgcgccca
     3421 ccggaaggag ctgactgggt tgaaggctct caagggcatc ggtcgagatc ccggtgccta
     3481 atgagtgagc taacttacat taattgcgtt gcgctcactg cccgctttcc agtcgggaaa
     3541 cctgtcgtgc cagctgcatt aatgaatcgg ccaacgcgcg gggagaggcg gtttgcgtat
     3601 tgggcgccag ggtggttttt cttttcacca gtgagacggg caacagctga ttgcccttca
     3661 ccgcctggcc ctgagagagt tgcagcaagc ggtccacgct ggtttgcccc agcaggcgaa
     3721 aatcctgttt gatggtggtt aacggcggga tataacatga gctgtcttcg gtatcgtcgt
     3781 atcccactac cgagatgtcc gcaccaacgc gcagcccgga ctcggtaatg gcgcgcattg
     3841 cgcccagcgc catctgatcg ttggcaacca gcatcgcagt gggaacgatg ccctcattca
     3901 gcatttgcat ggtttgttga aaaccggaca tggcactcca gtcgccttcc cgttccgcta
     3961 tcggctgaat ttgattgcga gtgagatatt tatgccagcc agccagacgc agacgcgccg
     4021 agacagaact taatgggccc gctaacagcg cgatttgctg gtgacccaat gcgaccagat
     4081 gctccacgcc cagtcgcgta ccgtcttcat gggagaaaat aatactgttg atgggtgtct
     4141 ggtcagagac atcaagaaat aacgccggaa cattagtgca ggcagcttcc acagcaatgg
     4201 catcctggtc atccagcgga tagttaatga tcagcccact gacgcgttgc gcgagaagat
     4261 tgtgcaccgc cgctttacag gcttcgacgc cgcttcgttc taccatcgac accaccacgc
     4321 tggcacccag ttgatcggcg cgagatttaa tcgccgcgac aatttgcgac ggcgcgtgca
     4381 gggccagact ggaggtggca acgccaatca gcaacgactg tttgcccgcc agttgttgtg
     4441 ccacgcggtt gggaatgtaa ttcagctccg ccatcgccgc ttccactttt tcccgcgttt
     4501 tcgcagaaac gtggctggcc tggttcacca cgcgggaaac ggtctgataa gagacaccgg
     4561 catactctgc gacatcgtat aacgttactg gtttcacatt caccaccctg aattgactct
     4621 cttccgggcg ctatcatgcc ataccgcgaa aggttttgcg ccattcgatg gtgtccggga
     4681 tctcgacgct ctcccttatg cgactcctgc attaggaagc agcccagtag taggttgagg
     4741 ccgttgagca ccgccgccgc aaggaatggt gcatgcaagg agatggcgcc caacagtccc
     4801 ccggccacgg ggcctgccac catacccacg ccgaaacaag cgctcatgag cccgaagtgg
     4861 cgagcccgat cttccccatc ggtgatgtcg gcgatatagg cgccagcaac cgcacctgtg
     4921 gcgccggtga tgccggccac gatgcgtccg gcgtagagga tcgagatcga tctcgatccc
     4981 gcgaaattaa tacgactcac tataggggaa ttgtgagcgg ataacaattc ccctctagaa
     5041 ataattttgt ttaactttaa gaaggagata tacatATGGG AAGTTCAGTA AAAATTATAT
     5101 CTAGGAAGAG CCTGGGTACG CAAAACGTTT ACGACATCGG CGTGGAAAAA GACCACAATT
     5161 TCCTACTTAA GAACGGTCTG GTAGCCAGCA ACTGCTTTAA CGGTGGTAGC GGGGGGTCTG
     5221 GCGGCTCCGG TGGCTCTGGT GGTTCTGGAG GTTCCGGTGG TAGCGGTGGG AGTGGCGGCT
     5281 CTGTGATCCC GGACTACTTC AAGCAAAGCT TCCCGGAGGG ATATAGCTGG GAACGTAGCA
     5341 TGACCTATGA AGATGGCGGC ATCTGCATTG CGACGAATGA TATCACCATG GAAGGCGATT
     5401 CGTTCATTAA CAAGATCCAC TTTCAGGGTA CGAACTTTCC GCCTAATGGC CCAGTGATGC
     5461 AGAAACGTAC CGTGGGTTGG GAAGCAAGCA CCGAAAAAAT GTATGAGCGC GATGGCGTGC
     5521 TGAAGGGCGA CGTCAAGATG AAACTCCTCC TTAAGGGTGG TGGCCACTAT CGCGGTGATT
     5581 ACCGCACCAC CTACAAAGTT AAGCAAAAAC CGGTTAAGTT ACCGGACTGT CATTTCGTGG
     5641 ACCATCGTAT TGAGATCCTG AGCCACGATA AAGATTACAA TAAGGTGAAA TTGTATGAAC
     5701 ATGCAGTTGC GAAAACCAGT ACCGATAGCA TGGATGAACT GTATAAAGGT GGTTCCGGTG
     5761 GAATGGTCAG CAAGGGCGAG GAAACCATTA CCAGCGTTAT CAAACCGGAC ATGAAGAACA
     5821 AGCTGCGTAT GGAAGGGAAC GTGAATGGCC ACGCGTTCGT TATAGAGGGT GAGGGTTCAG
     5881 GAAAGCCATT CGAGGGCATC CAGACCATCG ACCTGGAAGT TAAAGAAGGC GCACCGCTGC
     5941 CGTTCGCTTA CGACATCCTC ACCACTGCGT TTCATTACGG CAACCGTGTT TTTACCAAAT
     6001 ACCCGCGTGG CGGATCGGGC GGCAGCGGCG GTAGCGGAGG CTCTGGTGGC AGCGGTGGTT
     6061 CTGGTGGCTC CGGTGGTAGC GGCGGATCCA TGGTATCAAA AGGAGAGGAA GATAATATGG
     6121 CGATTATCAA AGAATTCATG CGTTTTAAGG TACACATGGA AGGCTCCGTG AACGGTCACG
     6181 AGTTCGAGAT TGAAGGTGAG GGCGAGGGCC GTCCGTATGA AGGCACCCAA ACCGCGAAAT
     6241 TGAAGGTGAC CAAAGGCGGA CCGCTGCCAT TTGCGTGGGA CATCCTGTCG CCGCAGTTTA
     6301 TGTATGGTTC CAAAGCCTAC GTTAAGCACC CGGCAGATAT CCCGGATTAC CTGAAGCTTA
     6361 GCTTTCCGGA GGGTTTTAAA TGGGAACGTG TTATGAACTT CGAGGACGGC GGTGTTGTCA
     6421 CGGTGACGCA AGACAGCTCT CTGCAAGACG GCGAGTTCAT CTACAAGGTG AAGTTGCGCG
     6481 GCACTAATTT CCCGAGCGAT GGTCCTGTGA TGCAGAAAAA GACCATGGGT TGGGAGGCTA
     6541 GCAGCGAACG CATGTACCCG GAAGACGGTG CGCTGAAGGG CGAGATCAAG CAGCGTCTGA
     6601 AGCTCAAAGA TGGCGGTCAT TATGATGCGG AAGTTAAAAC CACCTATAAG GCTAAAAAAC
     6661 CGGTTCAGCT GCCGGGTGCC TACAACGTCA ACATTAAATT GGACATCACT TCACATAATG
     6721 AAGACTACAC CATTGTGGAA CAGTACGAGC GCGCAGAGGG CCGTCATAGC ACCGGTGGTA
     6781 TGGATGAACT GTATAAAGGT GGCAGCGGAG GCTCCGGTGG CTCAGGTGGT TCTGGGGGCT
     6841 CTGGTGGTAG CCTGGCTGAG ACAGGTGGCG GTTCGGGTGG GAGCGGTGGC TCGGCACATA
     6901 TCGTGATGGT TGACGCCTAT AAGCCGACCA AAGGCGGTTC CGGCGGATCT GGTGGTTCGC
     6961 ACCACCATCA CCACCACGGT GGATCTGGCG GTTCTGGCGG TAGCGCGGAA TATTGTCTGA
     7021 GCTATGACAC CGAGATTTTG ACCGTCGAGT ACGGCTTTCT GCCGATTGGT AAAATTGTTG
     7081 AAGAGCGTAT CGAGTGCACC GTGTACACCG TTGACAAGAA CGGCTTCGTG TATACTCAGC
     7141 CGATCGCGCA GTGGCACAAC CGCGGTGAGC AGGAGGTGTT TGAATACTGC TTGGAGGACG
     7201 GCAGCATTAT CAGAGCAACC AAGGACCATA AATTCATGAC CACGGATGGC CAAATGCTGC
     7261 CTATTGATGA AATTTTTGAG CGTGGTCTGG ACCTCAAGCA AGTTGATGGT CTGCCGGCAG
     7321 CCAACGACGA GAACTATGCG CTGGCGGCGT AActcgagca ccaccaccac caccactgag
     7381 atccggctgc taacaaagcc cgaaaggaag ctgagttggc tgctgccacc gctgagcaat
     7441 aactagcata accccttggg gcctctaaac gggtcttgag gggttttttg ctgaaaggag
     7501 gaactatatc cggat
//