LOCUS       Exported                5335 bp ds-DNA     circular SYN 03-OCT-2024
DEFINITION  .
ACCESSION   .
VERSION     .
KEYWORDS    .
SOURCE      synthetic DNA construct
  ORGANISM  synthetic DNA construct
REFERENCE   1  (bases 1 to 5335)
  AUTHORS   Trial User
  TITLE     Direct Submission
  JOURNAL   Exported Wednesday, Dec 3, 2025 from SnapGene 5.0.8
            https://www.snapgene.com
FEATURES             Location/Qualifiers
     source          1..5335
                     /organism="synthetic DNA construct"
                     /mol_type="other DNA"
     promoter        35..53
                     /label=SP6 promoter
                     /note="promoter for bacteriophage SP6 RNA polymerase"
                     /note="color: #ffffff; direction: RIGHT"
     primer_bind     62..152
                     /label=pCS2_Bamh1_Flag_dreAdar
                     /note="color: black; sequence: 
                     TACTTGTTCTTTTTGCAGatggactacaaggacgatgacaagggcggaCAGCTGGACCA
                     AACACCGTC; added: 2023-11-15"
     primer_bind     79..125
                     /label=1747
                     /note="color: black; sequence: 
                     GGATCCCATCGATTCGccATGTACCCATACGATGTTCCAGATTACGC"
     CDS             97..126
                     /codon_start=1
                     /label=HA
                     /note="color: #0000ff"
                     /translation="MYPYDVPDYA"
     primer_bind     100..153
                     /label=1141a-HA-Adar1-forw
                     /note="color: black; sequence: 
                     TACCCATACGATGTTCCAGATTACGCTggcggaCAGCTGGACCAAACACCGTCC"
     primer_bind     100..125
                     /label=Primer 1- FMRP1 For
                     /note="color: black; sequence: 
                     CACTCGTGAATGGAGTACCCTACCCATACGATGTTCCAGATTACGC; added: 
                     2024-10-03"
     misc_feature    133..1337
                     /label=Catalytic Site
                     /note="color: #ff6600; direction: RIGHT"
     CDS             133..1337
                     /codon_start=1
                     /label=adarb1a
                     /note="color: #993366"
                     /translation="QLDQTPSRQPIPREGLQLHLPQVLADAVSRLVVDKFSELTDNFSS
                     PHARRKVLAGVVMTTGKDVMDAQVICVTTGTKCINGEYMSDRGLALNDCHAEIIARRSL
                     IRYLYNQLEYFLSDSTEEHEKSIFRWCSEHGYRLKDDIQFHLYISTSPCGDARIFSPHE
                     AGAEDQGDRHPNRKARGQLRTKIESGEGTIPVRTSNTIQTWDGVLQGERLLTMSCSDKI
                     ARWNVIGVQGSLLSYFTEPIYFSSLILGSLYHADHLSRAMYQRIADMDDIPPPFRINRP
                     LLSGISNTEARQPGKAPNFSVNWTVGDQGLEIINATTGKDDLGRQSQLCKHALYSRWVC
                     LHAKLSETLRIRGSRPGSYHEAKQGAVEYHEAKQTLFKAFYKAGLGAWVEKPIEQDQFS
                     LT"
     primer_bind     133..149
                     /label=1111a
                     /note="color: black; sequence: 
                     GGCCCCCCCTCGAGGATGCAGCTGGACCAAACACC"
     primer_bind     133..149
                     /label=1101a
                     /note="color: black; sequence: ATGCAGCTGGACCAAACACC"
     primer_bind     complement(1311..1362)
                     /label=1141b-Adar1-Rev
                     /note="color: black; sequence: 
                     CTAGAGGCTCGAGAGGCCTTGCTAGGGAGTAAGGGAAAACTGGTCTTGTTCG"
     primer_bind     complement(1312..1359)
                     /label=dreAdar_bamh1_pCS2_Ecor1
                     /note="color: black; sequence: 
                     GAGGCTCGAGAGGCCTTGGGATCCGGGAGTAAGGGAAAACTGGTCTTGTTC; added:
                     2023-11-15"
     primer_bind     complement(1314..1338)
                     /label=1111b
                     /note="color: black; sequence: 
                     gggtacatggtggcGGGAGTAAGGGAAAACTGGTCTTGT"
     primer_bind     complement(1314..1337)
                     /label=1101b
                     /note="color: black; sequence: AGGAGTAAGGGAAAACTGGTCTTGT"
     primer_bind     complement(1315..1365)
                     /label=Primer 1 - FMRP1 Rev
                     /note="color: black; sequence: 
                     GTTCTAGAGGCTCGAGAGGCTAGGGAGTAAGGGAAAACTGGTCTTG; added: 
                     2024-10-03"
     primer_bind     1350..1376
                     /label=rev_site
                     /note="color: black; sequence: 
                     CACTTATTCGTCCAACTCGAGCCTCTAGAACTATAGTGAGTC"
     misc_feature    1360..1387
                     /label=stop codons
                     /note="stop codons in all three reading frames"
                     /note="color: #ff0000"
     polyA_signal    1387..1521
                     /label=SV40 poly(A) signal
                     /note="SV40 polyadenylation signal"
                     /note="color: #a6acb3"
     primer_bind     complement(1409..1430)
                     /label=1017b
                     /note="color: black; sequence: GTGGTTTGTCCAAACTCATCAA"
     promoter        complement(1634..1652)
                     /label=T3 promoter
                     /note="promoter for bacteriophage T3 RNA polymerase"
                     /note="color: #ffffff; direction: LEFT"
     primer_bind     complement(1673..1689)
                     /label=M13 rev
                     /note="common sequencing primer, one of multiple similar 
                     variants"
                     /note="color: #a020f0; direction: LEFT"
     protein_bind    1697..1713
                     /label=lac operator
                     /bound_moiety="lac repressor encoded by lacI"
                     /note="The lac repressor binds to the lac operator to 
                     inhibit transcription in E. coli. This inhibition can be 
                     relieved by adding lactose or 
                     isopropyl-beta-D-thiogalactopyranoside (IPTG)."
                     /note="color: #31849b"
     promoter        complement(1721..1751)
                     /label=lac promoter
                     /note="promoter for the E. coli lac operon"
                     /note="This reverse directional feature has 3 segments:
                        1: 1721 .. 1727 / #ffffff / -10
                        2: 1728 .. 1745 / #ffffff
                        3: 1746 .. 1751 / #ffffff / -35"
     rep_origin      complement(2075..2663)
                     /direction=LEFT
                     /label=ori
                     /note="high-copy-number ColE1/pMB1/pBR322/pUC origin of 
                     replication"
                     /note="color: #ffff00"
     CDS             complement(2834..3694)
                     /codon_start=1
                     /gene="bla"
                     /product="beta-lactamase"
                     /label=AmpR
                     /note="confers resistance to ampicillin, carbenicillin, and
                     related antibiotics"
                     /note="This feature has 2 segments:
                        1: 2834 .. 3625 / #ccffcc
                        2: 3626 .. 3694 / #ccffcc / signal sequence
                     Cleavage site after base 3625"
                     /translation="MSIQHFRVALIPFFAAFCLPVFAHPETLVKVKDAEDQLGARVGYI
                     ELDLNSGKILESFRPEERFPMMSTFKVLLCGAVLSRIDAGQEQLGRRIHYSQNDLVEYS
                     PVTEKHLTDGMTVRELCSAAITMSDNTAANLLLTTIGGPKELTAFLHNMGDHVTRLDRW
                     EPELNEAIPNDERDTTMPVAMATTLRKLLTGELLTLASRQQLIDWMEADKVAGPLLRSA
                     LPAGWFIADKSGAGERGSRGIIAALGPDGKPSRIVVIYTTGSQATMDERNRQIAEIGAS
                     LIKHW"
     promoter        complement(3695..3799)
                     /gene="bla"
                     /label=AmpR promoter
                     /note="color: #ffffff; direction: LEFT"
     rep_origin      complement(3825..4280)
                     /direction=LEFT
                     /label=f1 ori
                     /note="f1 bacteriophage origin of replication; arrow 
                     indicates direction of (+) strand synthesis"
                     /note="color: #ffff00"
     promoter        4354..5335
                     /label=CMV IE94 promoter
                     /note="enhancer/promoter region of simian cytomegalovirus 
                     major immediate early transcription unit IE94"
                     /note="color: #ffffff; direction: RIGHT"
     primer_bind     join(5323..5335,1..9)
                     /label=1017a
                     /note="color: black; sequence: TCGTTTAGGGAACCGCCATTCT"
ORIGIN
        1 cgccattctg cctggggacg tcggagcaag cttgatttag gtgacactat agaatacaag
       61 ctacttgttc tttttgcagg atcccatcga ttcgccatgt acccatacga tgttccagat
      121 tacgctggcg gacagctgga ccaaacaccg tcccgacagc caatccccag ggagggactt
      181 cagctgcatt tgccccaggt cctcgcggat gcggtctctc gtttagttgt ggataagttc
      241 agcgagctga cagacaactt ctcgtctcca catgcacggc ggaaagtcct ggcaggagtt
      301 gtcatgacaa ccggtaagga tgtgatggac gctcaggtga tttgtgtgac gacgggaacc
      361 aagtgtataa acggagagta catgagcgat cgaggactgg cccttaatga ctgccatgct
      421 gagatcatcg cacggcgctc actcattaga tacctgtaca atcagctgga atacttcctc
      481 agcgacagca ctgaagaaca tgagaaatcc atattcagat ggtgcagtga acatggctac
      541 cggctaaaag atgatattca attccatctg tatatcagca cgtcgccctg tggagacgcc
      601 cggatcttct cccctcatga ggctggtgcc gaggaccagg gtgaccgaca tccaaaccgc
      661 aaggcccgtg gacaactacg aaccaagatt gagtctggag aaggaacgat acctgttcgt
      721 acgagtaaca ccattcagac ttgggatgga gtcctgcagg gagagcgact gctaaccatg
      781 tcatgcagtg acaaaattgc cagatggaac gtgatcggag tacagggatc tcttctgagt
      841 tacttcacag agcccatcta tttctccagt ttaattctgg gaagtctgta tcatgctgac
      901 catctttcca gagccatgta ccagcgcatc gcagacatgg atgatattcc cccgccattc
      961 agaatcaaca gaccacttct tagcggtatc agtaacacag aagcaaggca acctgggaaa
     1021 gctcctaatt tcagcgtcaa ctggacagta ggagaccagg ggttggagat cattaacgca
     1081 accacaggaa aagatgacct cggaagacag tcgcaacttt gcaaacacgc tctttacagt
     1141 cgttgggtct gtctacatgc aaagctcagt gagactctgc ggatccgagg atctcggcct
     1201 ggctcctacc acgaggcaaa acaaggggcg gtcgagtatc atgaggcgaa acagactctt
     1261 ttcaaagctt tctacaaagc gggactggga gcatgggtgg aaaaacccat cgaacaagac
     1321 cagttttccc ttactcccta gcaaggcctc tcgagcctct agaactatag tgagtcgtat
     1381 tacgtagatc cagacatgat aagatacatt gatgagtttg gacaaaccac aactagaatg
     1441 cagtgaaaaa aatgctttat ttgtgaaatt tgtgatgcta ttgctttatt tgtaaccatt
     1501 ataagctgca ataaacaagt taacaacaac aattgcattc attttatgtt tcaggttcag
     1561 ggggaggtgt gggaggtttt ttaattcgcg gccgcggcgc caatgcattg ggcccggtac
     1621 ccagcttttg ttccctttag tgagggttaa ttgcgcgctt ggcgtaatca tggtcatagc
     1681 tgtttcctgt gtgaaattgt tatccgctca caattccaca caacatacga gccgggagca
     1741 taaagtgtaa agcctggggt gcctaatgag tgagctaact cacattaatt gcgttgcgct
     1801 cactgcccgc tttccagtcg ggaaacctgt cgtgccagct gcattaatga atcggccaac
     1861 gcgcggggag aggcggtttg cgtattgggc gctcttccgc ttcctcgctc actgactcgc
     1921 tgcgctcggt cgttcggctg cggcgagcgg tatcagctca ctcaaaggcg gtaatacggt
     1981 tatccacaga atcaggggat aacgcaggaa agaacatgtg agcaaaaggc cagcaaaagg
     2041 ccaggaaccg taaaaaggcc gcgttgctgg cgtttttcca taggctccgc ccccctgacg
     2101 agcatcacaa aaatcgacgc tcaagtcaga ggtggcgaaa cccgacagga ctataaagat
     2161 accaggcgtt tccccctgga agctccctcg tgcgctctcc tgttccgacc ctgccgctta
     2221 ccggatacct gtccgccttt ctcccttcgg gaagcgtggc gctttctcat agctcacgct
     2281 gtaggtatct cagttcggtg taggtcgttc gctccaagct gggctgtgtg cacgaacccc
     2341 ccgttcagcc cgaccgctgc gccttatccg gtaactatcg tcttgagtcc aacccggtaa
     2401 gacacgactt atcgccactg gcagcagcca ctggtaacag gattagcaga gcgaggtatg
     2461 taggcggtgc tacagagttc ttgaagtggt ggcctaacta cggctacact agaagaacag
     2521 tatttggtat ctgcgctctg ctgaagccag ttaccttcgg aaaaagagtt ggtagctctt
     2581 gatccggcaa acaaaccacc gctggtagcg gtggtttttt tgtttgcaag cagcagatta
     2641 cgcgcagaaa aaaaggatct caagaagatc ctttgatctt ttctacgggg tctgacgctc
     2701 agtggaacga aaactcacgt taagggattt tggtcatgag attatcaaaa aggatcttca
     2761 cctagatcct tttaaattaa aaatgaagtt ttaaatcaat ctaaagtata tatgagtaaa
     2821 cttggtctga cagttaccaa tgcttaatca gtgaggcacc tatctcagcg atctgtctat
     2881 ttcgttcatc catagttgcc tgactccccg tcgtgtagat aactacgata cgggagggct
     2941 taccatctgg ccccagtgct gcaatgatac cgcgagaccc acgctcaccg gctccagatt
     3001 tatcagcaat aaaccagcca gccggaaggg ccgagcgcag aagtggtcct gcaactttat
     3061 ccgcctccat ccagtctatt aattgttgcc gggaagctag agtaagtagt tcgccagtta
     3121 atagtttgcg caacgttgtt gccattgcta caggcatcgt ggtgtcacgc tcgtcgtttg
     3181 gtatggcttc attcagctcc ggttcccaac gatcaaggcg agttacatga tcccccatgt
     3241 tgtgcaaaaa agcggttagc tccttcggtc ctccgatcgt tgtcagaagt aagttggccg
     3301 cagtgttatc actcatggtt atggcagcac tgcataattc tcttactgtc atgccatccg
     3361 taagatgctt ttctgtgact ggtgagtact caaccaagtc attctgagaa tagtgtatgc
     3421 ggcgaccgag ttgctcttgc ccggcgtcaa tacgggataa taccgcgcca catagcagaa
     3481 ctttaaaagt gctcatcatt ggaaaacgtt cttcggggcg aaaactctca aggatcttac
     3541 cgctgttgag atccagttcg atgtaaccca ctcgtgcacc caactgatct tcagcatctt
     3601 ttactttcac cagcgtttct gggtgagcaa aaacaggaag gcaaaatgcc gcaaaaaagg
     3661 gaataagggc gacacggaaa tgttgaatac tcatactctt cctttttcaa tattattgaa
     3721 gcatttatca gggttattgt ctcatgagcg gatacatatt tgaatgtatt tagaaaaata
     3781 aacaaatagg ggttccgcgc acatttcccc gaaaagtgcc acctaaattg taagcgttaa
     3841 tattttgtta aaattcgcgt taaatttttg ttaaatcagc tcatttttta accaataggc
     3901 cgaaatcggc aaaatccctt ataaatcaaa agaatagacc gagatagggt tgagtgttgt
     3961 tccagtttgg aacaagagtc cactattaaa gaacgtggac tccaacgtca aagggcgaaa
     4021 aaccgtctat cagggcgatg gcccactacg tgaaccatca ccctaatcaa gttttttggg
     4081 gtcgaggtgc cgtaaagcac taaatcggaa ccctaaaggg agcccccgat ttagagcttg
     4141 acggggaaag ccggcgaacg tggcgagaaa ggaagggaag aaagcgaaag gagcgggcgc
     4201 tagggcgctg gcaagtgtag cggtcacgct gcgcgtaacc accacacccg ccgcgcttaa
     4261 tgcgccgcta cagggcgcgt cccattcgcc attcaggctg cgcaactgtt gggaagggcg
     4321 atcggtgcgg gcctcttcgc tattacgcca gtcgaccgcc aattcaatat ggcgtatatg
     4381 gactcatgcc aattcaatat ggtggatctg gacctgtgcc aattcaatat ggcgtatatg
     4441 gactcgtgcc aattcaatat ggtggatctg gaccccagcc aattcaatat ggcggacttg
     4501 gcaccatgcc aattcaatat ggcggacctg gcactgtgcc aactggggag gggtctactt
     4561 ggcacggtgc caagtttgag gaggggtctt ggccctgtgc caagtccgcc atattgaatt
     4621 ggcatggtgc caataatggc ggccatattg gctatatgcc aggatcaata tataggcaat
     4681 atccaatatg gccctatgcc aatatggcta ttggccaggt tcaatactat gtattggccc
     4741 tatgccatat agtattccat atatgggttt tcctattgac gtagatagcc cctcccaatg
     4801 ggcggtccca tataccatat atggggcttc ctaataccgc ccatagccac tcccccattg
     4861 acgtcaatgg tctctatata tggtctttcc tattgacgtc atatgggcgg tcctattgac
     4921 gtatatggcg cctcccccat tgacgtcaat tacggtaaat ggcccgcctg gctcaatgcc
     4981 cattgacgtc aataggacca cccaccattg acgtcaatgg gatggctcat tgcccattca
     5041 tatccgttct cacgccccct attgacgtca atgacggtaa atggcccact tggcagtaca
     5101 tcaatatcta ttaatagtaa cttggcaagt acattactat tggaagtacg ccagggtaca
     5161 ttggcagtac tcccattgac gtcaatggcg gtaaatggcc cgcgatggct gccaagtaca
     5221 tccccattga cgtcaatggg gaggggcaat gacgcaaatg ggcgttccat tgacgtaaat
     5281 gggcggtagg cgtgcctaat gggaggtcta tataagcaat gctcgtttag ggaac
//
