LOCUS AF310254 622 bp DNA linear VRT 13-MAY-2014

DEFINITION Oncorhynchus mykiss Mx1 gene, promoter and partial sequence.

ACCESSION AF310254

VERSION AF310254.2 GI:633933854

KEYWORDS .

SOURCE Oncorhynchus mykiss (rainbow trout)

ORGANISM Oncorhynchus mykiss

Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;

Actinopterygii; Neopterygii; Teleostei; Protacanthopterygii;

Salmoniformes; Salmonidae; Salmoninae; Oncorhynchus.

REFERENCE 1 (bases 1 to 622)

AUTHORS Collet,B. and Secombes,C.J.

TITLE The rainbow trout (Oncorhynchus mykiss) Mx1 promoter. Structural

and functional characterization

JOURNAL Eur. J. Biochem. 268 (6), 1577-1584 (2001)

PUBMED 11248675

REFERENCE 2 (bases 1 to 622)

AUTHORS Collet,B. and Secombes,C.J.

TITLE Direct Submission

JOURNAL Submitted (03-OCT-2000) Zoology, University of Aberdeen, Tillydrone

Avenue, Aberdeen, Scotland AB24 2TZ, UK

REFERENCE 3 (bases 1 to 622)

AUTHORS Collet,B. and Secombes,C.J.

TITLE Direct Submission

JOURNAL Submitted (13-MAY-2014) Zoology, University of Aberdeen, Tillydrone

Avenue, Aberdeen, Scotland AB24 2TZ, UK

REMARK Sequence update by submitter

FEATURES Location/Qualifiers

source 1..622

/organism="Oncorhynchus mykiss"

/mol_type="genomic DNA"

/db_xref="taxon:8022"

gene <1..>622

/gene="Mx1"

promoter 1..590

/gene="Mx1"

protein_bind 204..213

/gene="Mx1"

/bound_moiety="SP1"

TATA_signal 462..466

/gene="Mx1"

misc_feature 490..502

/gene="Mx1"

/note="interferon stimulatable response element (ISRE)"

mRNA 592..>622

/gene="Mx1"

/product="Mx1"

BASE COUNT 167 a 161 c 152 g 142 t

ORIGIN

1 aatggcaaaa cactgacatt cctgtcttgc aggaaatcct gcacagaacg agcagtatgg

61 ctggtggcat tgtaatgcta gaggttgatg tcaggatgag cctgcaggaa gggtacaaaa

121 tgagggagga ggatgtcttc cctgtatcac actgcgttga gattgcctgc tatgacaaca

181 agctcagtcc gatgatgctg tgacgcaccg ccccagacca agacggaccc tccacctcca

241 aatcgatccc gctccagagt acaggcctcg gtgtaacgct cattccttcg acgataaacg

301 cgaatcagac catcacccct ggtgagacaa aaccgcgact cgtcggtgaa gagcactttt

361 tgccagtcct gtctggtcta gcgacggtgt gtttatgccc ataggcgacg ttgttgggga

421 acccttccat atagccttac cccatcccat ggcagcatcc agcttcagca ctaactttca

481 attgagacat gaaagtgaaa cataccgtgt aagattcgat tcccaggaat gatactccct

541 ccgttttaca aaaccggttg ttataaaaac gagtcgagag taaaaactct ccctctcgta

601 gaagggactg gagtttgagg ag

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