LOCUS       pHD1                    3087 bp    DNA     circular     10-DEC-2010
SOURCE      
  ORGANISM  
COMMENT     This file is created by Vector NTI
            http://www.invitrogen.com/
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COMMENT     VNTDBDATE|573229794|
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COMMENT                                   15.8887 3.45752 7.14325 1.04901 #145#) 
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COMMENT                                   4.01685 14.8576 7.24316 1.04901 #147#) 
COMMENT                             #149=(CScratch 
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FEATURES             Location/Qualifiers
     misc_feature    272..1462
                     /dnas_title="TetR"
                     /vntifkey="21"
                     /label=TetR
     promoter        229..235
                     /dnas_title="Tet_promoter"
                     /vntifkey="30"
                     /label=Tet_promoter
     primer_bind     3526..3545
                     /dnas_title="pTC14_F1 primer"
                     /vntifkey="28"
                     /label=pTC14_F1 primer
     misc_feature    1633..1633
                     /dnas_title="end"
                     /vntifkey="21"
                     /label=end
     primer_bind     1703..1724
                     /dnas_title="pTC14_R1 primer"
                     /vntifkey="28"
                     /label=pTC14_R1 primer
     misc_feature    1..1
                     /dnas_title="start"
                     /vntifkey="21"
                     /label=start
     primer_bind     1607..1626
                     /dnas_title="pTC14_F2 primer"
                     /vntifkey="28"
                     /label=pTC14_F2 primer
     misc_feature    2457..3130
                     /dnas_title="ori"
                     /vntifkey="21"
                     /label=ori
     misc_feature    1754..1759
                     /note="BsaI site"
     misc_feature    2387..2392
                     /note="BsaI site"
     misc_feature    1761..1764
                     /note="4nt"
     misc_feature    1765..2385
                     /note="4nt"
     TATA_signal     2060..2067
                     /note="TATA box"
     misc_feature    2091..2091
                     /note="first necletide transcript"
     misc_feature    2026..2035
                     /note="USE"
     terminator      2207..2381
                     /note="AtU3 terminator"
     misc_feature    2124..2206
                     /note="guide RNA scaffold"
     misc_structure  2092..2123
                     /note="guide RNA cloning site"
     modified_base   1840..1840
                     /note="G to c"
     promoter        1765..2090
                     /note="AtU3 promoter"
     PCR_primer      1765..1787
                     /primer="pYPQ13XB-F"
                     /set="Set 1"
                     /pair="Pair 1"
                     /current=1
     PCR_product     1765..2381
                     /pair="Pair 1"
                     /set="Set 1"
                     /current=1
                     /score="0.000"
     PCR_frame       1765..2381
                     /note="Reading Frame"
                     /set="Set 1"
     PCR_primer      complement(2359..2381)
                     /primer="pYPQ13xB-R"
                     /set="Set 1"
                     /pair="Pair 1"
                     /current=1
     source          1..3634
                     /dnas_title="pYPQ131B"
ORIGIN      
        1 ctgcattaat gaatcggcca acgcgcgggg agaggcggtt tgcgtattgg gcgctcttcc
       61 gcttcctcgc tcactgactc gctgcgctcg gtcgttcggc tgcggcgagc ggtatcagct
      121 cactcaaagg cggtaatacg gttatccaca gaatcagggg ataacgcagg aaagaacatg
      181 aattaattct catgtttgac agcttatcat cgattagctt taatgcggta gtttatcaca
      241 gttaaattgc taacgcagtc aggcaccgtg tatgaaatct aacaatgcgc tcatcgtcat
      301 cctcggcacc gtcaccctgg atgctgtagg cataggcttg gttatgccgg tactgccggg
      361 cctcttgcgg gatatcgtcc attccgacag catcgccagt cactatggcg tgctgctagc
      421 gctatatgcg ttgatgcaat ttctatgcgc acccgttctc ggagcactgt ccgaccgctt
      481 tggccgccgc ccagtcctgc tcgcttcgct acttggagcc actatcgact acgcgatcat
      541 ggcgaccaca cccgtcctgt ggattctcta cgccggacgc atcgtggccg gcatcaccgg
      601 cgccacaggt gcggttgctg gcgcctatat cgccgacatc accgatgggg aagatcgggc
      661 tcgccacttc gggctcatga gcgcttgttt cggcgtgggt atggtggcag gccccgtggc
      721 cgggggactg ttgggcgcca tctccttaca tgcaccattc cttgcggcgg cggtgctcaa
      781 cggcctcaac ctactactgg gctgcttcct aatgcaggag tcgcataagg gagagcgccg
      841 acccatgccc ttgagagcct tcaacccagt cagctccttc cggtgggcgc ggggcatgac
      901 tatcgtcgcc gcacttatga ctgtcttctt tatcatgcaa ctcgtaggac aggtgccggc
      961 agcgctctgg gtcattttcg gcgaggaccg ctttcgctgg agcgcgacga tgatcggcct
     1021 gtcgcttgcg gtattcggaa tcttgcacgc cctcgctcaa gccttcgtca ctggtcccgc
     1081 caccaaacgt ttcggcgaga agcaggccat tatcgccggc atggcggccg acgcgctggg
     1141 ctacgtcttg ctggcgttcg cgacgcgagg ctggatggcc ttccccatta tgattcttct
     1201 cgcttccggc ggcatcggga tgcccgcgtt gcaggccatg ctgtccaggc aggtagatga
     1261 cgaccatcag ggacagcttc aaggatcgct cgcggctctt accagcctaa cttcgatcat
     1321 tggaccgctg atcgtcacgg cgatttatgc cgcctcggcg agcacatgga acgggttggc
     1381 atggattgta ggcgccgccc tataccttgt ctgcctcccc gcgttgcgtc gcggtgcatg
     1441 gagccgggcc acctcgacct gaatggaagc cggcggcacc tcgctaacgg attcaccact
     1501 ccaagaattg gagccaatca attcttgcgg agaactgtga atgcgcaaac caacccttga
     1561 tcggggaaga acagtatgtc gagctatttt ttgacttact ggggatcaag cctgattggg
     1621 agaaaataaa atatccccta tagtgagtcg tattacatgg tcatagctgt ttcctggcag
     1681 ctctggcccg tgtctcaaaa tctctgatgt tacattgcac aagataaaaa tatatcatca
     1741 tgcctcctct agaggtctcg ctatTTTACT TTAAATTTTT CTTATGGCTC AGCCTGTGAT
     1801 GGATAACTGA ATCAAACAAA TGGCGTCTGG GTTTAAGAAc ATCTGTTTTG GCTATGTTGG
     1861 ACGAAACAAG TGAACTTTTA GGATCAACTT CCGTTTATAT ACGGAGCTTA TATCGAGCAA
     1921 TAAGATAAGT GGGCTTTTTA TGTAATTTAA TGGGCTATCG TCCATATATT CACTAATACC
     1981 CATGCCCAGT ACCCATGTAT GCGTTTCATA TAAGCTCCTA ATTTCTCCCA CATCGCTCAA
     2041 ATCTAAACAA ATCTTGTTGT ATATATAACA CTGAGGGAGC ACCATTGGTC Agagacgaga
     2101 tctagtctga gtcgaccgtc tctGTTTTAG AGCTAGAAAT AGCAAGTTAA AATAAGGCTA
     2161 GTCCGTTATC AACTTGAAAA AGTGGCACCG AGTCGGTGCT TTTTTTTCCC TTTCCTTTTT
     2221 TCTTTTTTTT GCCATAAACT TAAATTTGTA TATCGATCAT TGTAGATATT GAAAACCTAG
     2281 AACAAACCAA CATCCATGTG AATGTCTTTC ATGACTGATT TAGAGATAAT TCTTGAATTT
     2341 TGGAACTAGA ATCTATAATG AGCCTaaatt aaaacattgt gcatgggaga ccctcgagcc
     2401 acccatgacc aaaatccctt aacgtgagtt acgcgtcgtt ccactgagcg tcagaccccg
     2461 tagaaaagat caaaggatct tcttgagatc ctttttttct gcgcgtaatc tgctgcttgc
     2521 aaacaaaaaa accaccgcta ccagcggtgg tttgtttgcc ggatcaagag ctaccaactc
     2581 tttttccgaa ggtaactggc ttcagcagag cgcagatacc aaatactgtt cttctagtgt
     2641 agccgtagtt aggccaccac ttcaagaact ctgtagcacc gcctacatac ctcgctctgc
     2701 taatcctgtt accagtggct gctgccagtg gcgataagtc gtgtcttacc gggttggact
     2761 caagacgata gttaccggat aaggcgcagc ggtcgggctg aacggggggt tcgtgcacac
     2821 agcccagctt ggagcgaacg acctacaccg aactgagata cctacagcgt gagctatgag
     2881 aaagcgccac gcttcccgaa gggagaaagg cggacaggta tccggtaagc ggcagggtcg
     2941 gaacaggaga gcgcacgagg gagcttccag ggggaaacgc ctggtatctt tatagtcctg
     3001 tcgggtttcg ccacctctga cttgagcgtc gatttttgtg atgctcgtca ggggggcgga
     3061 gcctatggaa aaacgccagc aacgcggcct ttttacggtt cctggccttt tgctggcctt
     3121 ttgctcacat gttctttcct gcgttatccc ctgattctgt ggataaccgt attaccgcct
     3181 ttgagtgagc tgataccgct cgccgcagcc gaacgaccga gcgcagcgag tcagtgagcg
     3241 aggaagcgga agagcgccca atacgcaaac cgcctctccc cgcgcgttgg ccgattcatt
     3301 aatgcagctg gcacgacagg tttcccgact ggaaagcggg cagtgagcgc aacgcaatta
     3361 atacgcgtac cgctagccag gaagagtttg tagaaacgca aaaaggccat ccgtcaggat
     3421 ggccttctgc ttagtttgat gcctggcagt ttatggcggg cgtcctgccc gccaccctcc
     3481 gggccgttgc ttcacaacgt tcaaatccgc tcccggcgga tttgtcctac tcaggagagc
     3541 gttcaccgac aaacaacaga taaaacgaaa ggcccagtct tccgactgag cctttcgttt
     3601 tatttgatgc ctggcagttc cctactctcg cgtt
//

