LOCUS 3_pAAV_CAG_FLEX_ 6627 bp ds-DNA circular 17-FEB-2016 DEFINITION . ACCESSION VERSION SOURCE . ORGANISM . COMMENT COMMENT COMMENT ApEinfo:methylated:1 FEATURES Location/Qualifiers misc_feature 5350..5383 /label=loxp2272 /ApEinfo_fwdcolor=cyan /ApEinfo_revcolor=green /ApEinfo_graphicformat=arrow_data {{0 1 2 0 0 -1} {} 0} width 5 offset 0 misc_feature 3596..3629 /label=loxP2272 /ApEinfo_fwdcolor=cyan /ApEinfo_revcolor=green /ApEinfo_graphicformat=arrow_data {{0 1 2 0 0 -1} {} 0} width 5 offset 0 misc_feature 3692..3725 /label=loxP /ApEinfo_fwdcolor=cyan /ApEinfo_revcolor=green /ApEinfo_graphicformat=arrow_data {{0 1 2 0 0 -1} {} 0} width 5 offset 0 misc_feature 5454..5487 /label=loxP(1) /ApEinfo_label=loxP /ApEinfo_fwdcolor=cyan /ApEinfo_revcolor=green /ApEinfo_graphicformat=arrow_data {{0 1 2 0 0 -1} {} 0} width 5 offset 0 misc_feature complement(3750..5324) /label=oG /ApEinfo_fwdcolor=#408000 /ApEinfo_revcolor=#408000 /ApEinfo_graphicformat=arrow_data {{0 1 2 0 0 -1} {} 0} width 5 offset 0 misc_feature 2667..3582 /label=partial CAG promoter (not completed more to 5 side) /ApEinfo_fwdcolor=#400080 /ApEinfo_revcolor=#400080 /ApEinfo_graphicformat=arrow_data {{0 1 2 0 0 -1} {} 0} width 5 offset 0 misc_feature 5519..6127 /label=WPRE /ApEinfo_fwdcolor=#804000 /ApEinfo_revcolor=#804000 /ApEinfo_graphicformat=arrow_data {{0 1 2 0 0 -1} {} 0} width 5 offset 0 ORIGIN 1 cttccgcttc ctcgctcact gactcgctgc gctcggtcgt tcggctgcgg cgagcggtat 61 cagctcactc aaaggcggta atacggttat ccacagaatc aggggataac gcaggaaaga 121 acatgtgagc aaaaggccag caaaaggcca ggaaccgtaa aaaggccgcg ttgctggcgt 181 ttttccatag gctccgcccc cctgacgagc atcacaaaaa tcgacgctca agtcagaggt 241 ggcgaaaccc gacaggacta taaagatacc aggcgtttcc ccctggaagc tccctcgtgc 301 gctctcctgt tccgaccctg ccgcttaccg gatacctgtc cgcctttctc ccttcgggaa 361 gcgtggcgct ttctcatagc tcacgctgta ggtatctcag ttcggtgtag gtcgttcgct 421 ccaagctggg ctgtgtgcac gaaccccccg ttcagcccga ccgctgcgcc ttatccggta 481 actatcgtct tgagtccaac ccggtaagac acgacttatc gccactggca gcagccactg 541 gtaacaggat tagcagagcg aggtatgtag gcggtgctac agagttcttg aagtggtggc 601 ctaactacgg ctacactaga agaacagtat ttggtatctg cgctctgctg aagccagtta 661 ccttcggaaa aagagttggt agctcttgat ccggcaaaca aaccaccgct ggtagcggtg 721 gtttttttgt ttgcaagcag cagattacgc gcagaaaaaa aggatctcaa gaagatcctt 781 tgatcttttc tacggggtct gacgctcagt ggaacgaaaa ctcacgttaa gggattttgg 841 tcatgagatt atcaaaaagg atcttcacct agatcctttt aaattaaaaa tgaagtttta 901 aatcaatcta aagtatatat gagtaaactt ggtctgacag ttaccaatgc ttaatcagtg 961 aggcacctat ctcagcgatc tgtctatttc gttcatccat agttgcctga ctccccgtcg 1021 tgtagataac tacgatacgg gagggcttac catctggccc cagtgctgca atgataccgc 1081 gagacccacg ctcaccggct ccagatttat cagcaataaa ccagccagcc ggaagggccg 1141 agcgcagaag tggtcctgca actttatccg cctccatcca gtctattaat tgttgccggg 1201 aagctagagt aagtagttcg ccagttaata gtttgcgcaa cgttgttgcc attgctacag 1261 gcatcgtggt gtcacgctcg tcgtttggta tggcttcatt cagctccggt tcccaacgat 1321 caaggcgagt tacatgatcc cccatgttgt gcaaaaaagc ggttagctcc ttcggtcctc 1381 cgatcgttgt cagaagtaag ttggccgcag tgttatcact catggttatg gcagcactgc 1441 ataattctct tactgtcatg ccatccgtaa gatgcttttc tgtgactggt gagtactcaa 1501 ccaagtcatt ctgagaatag tgtatgcggc gaccgagttg ctcttgcccg gcgtcaatac 1561 gggataatac cgcgccacat agcagaactt taaaagtgct catcattgga aaacgttctt 1621 cggggcgaaa actctcaagg atcttaccgc tgttgagatc cagttcgatg taacccactc 1681 gtgcacccaa ctgatcttca gcatctttta ctttcaccag cgtttctggg tgagcaaaaa 1741 caggaaggca aaatgccgca aaaaagggaa taagggcgac acggaaatgt tgaatactca 1801 tactcttcct ttttcaatat tattgaagca tttatcaggg ttattgtctc atgagcggat 1861 acatatttga atgtatttag aaaaataaac aaataggggt tccgcgcaca tttccccgaa 1921 aagtgccacc taaattgtaa gcgttaatat tttgttaaaa ttcgcgttaa atttttgtta 1981 aatcagctca ttttttaacc aataggccga aatcggcaaa atcccttata aatcaaaaga 2041 atagaccgag atagggttga gtgttgttcc agtttggaac aagagtccac tattaaagaa 2101 cgtggactcc aacgtcaaag ggcgaaaaac cgtctatcag ggcgatggcc cactacgtga 2161 accatcaccc taatcaagtt ttttggggtc gaggtgccgt aaagcactaa atcggaaccc 2221 taaagggagc ccccgattta gagcttgacg gggaaagccg gcgaacgtgg cgagaaagga 2281 agggaagaaa gcgaaaggag cgggcgctag ggcgctggca agtgtagcgg tcacgctgcg 2341 cgtaaccacc acacccgccg cgcttaatgc gccgctacag ggcgcgtccc attcgccatt 2401 caggctgcgc aactgttggg aagggcgatc ggtgcgggcc tcttcgctat tacgccagct 2461 gcgcgctcgc tcgctcactg aggccgcccg ggcaaagccc gggcgtcggg cgacctttgg 2521 tcgcccggcc tcagtgagcg agcgagcgcg cagagaggga gtggccaact ccatcactag 2581 gggttccttg tagttaatga ttaacccgcc atgctactta tctacgtagc catgctctag 2641 gaagatcgta ccattgacgt caataatgac gtatgttccc atagtaacgc caatagggac 2701 tttccattga cgtcaatggg tggagtattt acggtaaact gcccacttgg cagtacatca 2761 agtgtatcat atgccaagta cgccccctat tgacgtcaat gacggtaaat ggcccgcctg 2821 gcattatgcc cagtacatga ccttatggga ctttcctact tggcagtaca tctacgtatt 2881 agtcatcgct attaccatgg tcgaggtgag ccccacgttc tgcttcactc tccccatctc 2941 ccccccctcc ccacccccaa ttttgtattt atttattttt taattatttt gtgcagcgat 3001 gggggcgggg gggggggggg ggcgcgcgcc aggcggggcg gggcggggcg aggggcgggg 3061 cggggcgagg cggagaggtg cggcggcagc caatcagagc ggcgcgctcc gaaagtttcc 3121 ttttatggcg aggcggcggc ggcggcggcc ctataaaaag cgaagcgcgc ggcgggcggg 3181 agtcgctgcg acgctgcctt cgccccgtgc cccgctccgc cgccgcctcg cgccgcccgc 3241 cccggctctg actgaccgcg ttactcccac aggtgagcgg gcgggacggc ccttctcctc 3301 cgggctgtaa ttagcgcttg gtttaatgac ggcttgtttc ttttctgtgg ctgcgtgaaa 3361 gccttgaggg gctccgggag ggccctttgt gcggggggag cggctcgggg ctgtccgcgg 3421 ggggacggct gccttcgggg gggacggggc agggcggggt tcggcttctg gcgtgtgacc 3481 ggcggctcta gagcctctgc taaccatgtt catgccttct tctttttcct acagctcctg 3541 ggcaacgtgc tggttattgt gctgtctcat cattttggca aagaattgga tccccataac 3601 ttcgtataaa gtatcctata cgaagttata tcaaaatagg aagaccaatg cttcaccatc 3661 gacccgaatt gccaagcatc accatcgacc cataacttcg tataatgtat gctatacgaa 3721 gttatactag ggatcccctt acttgtacaT TAGAGCCGTG TCTCGCCCCC AGATTTATGA 3781 CTTTCCCAAC TGCTGATGAT TTTACCGCTC TGGGGTGTGA CAGACACTTC TCTACCGGTC 3841 CCCCTCAGAT TGTGCTGAGT TGGCTCGGAG CGGTTCACTC GTCGCCAGCA GGTCATCAGG 3901 AAAATGATCA GCATGAGAGC AGTCAGTGCT CCAGCGGAGA GCAGCACGTA CTTGCCCCAA 3961 TTAGGCAGTC CGAGATCGAC GCCACTGATC CGTTCGTGCA CGTCGGGCAG GTGGACCTCC 4021 ACAAAATCTT CGGCCTCGTC GCCGTTTTTG AACACTGTGC TTGGGTCTGC GAGAGGATGC 4081 ATCAGGGGAA TGACGCTTGA CACGAGCAGT TCCATGTGCT GCTGGAGCAG ACTAGACTGC 4141 ATCTCGGGGA TCAGCACGTT ACCATCTGGC CCCAGAATGA TACCATTAAA GAAGACCCCG 4201 TTCACATGTG GGTGACATCG ACCCCCGACT CGCAGGCATC CCTTACTAGG AATGATTTCA 4261 TTCCAGGTTC TCACAGATTT ATAATGGGCG TCTGCCTCCA TCAGTGTCTT GTTAAAGATG 4321 GTGTATGCTT TTCCGAAGCC AGGGACGAGC TTCCTCAGGT GGCTCAGCCT CCTGAAGCTC 4381 ACGCTCTTGG TAGTCATAAT TGACTCCAGA GCATCGAGAC ATTCCTCCCT TTTCTTCACG 4441 AGTTCCTCGA CCACCAGATG TTCGATCTCA TCGCTTCGGA AGTCGTGCAG ATTCACGAGC 4501 TGCCCAGGGG GGCACCACTT AGTCTCGTTA GATGTCTGCA TAGCGACCCA GGTTCCGTCC 4561 ATCAGCCGGA GTCCCAGCAC GCCACAGAGT TTCAGCTTGC AGGCACCTTT GAGGCTCTTA 4621 TACAGCCCTC TTTCATCCAC AAATCCACAA GTCTCGCTGC CTTTTGAGGC CCTCTTGCCC 4681 CTGCTGTTGG TGAAGATGTC GCAGGACATC CCCAGCCTTG GATTCTCAGG CATCCAGATT 4741 GTATAATCAT GGTTGGTGGA ACAGTAAGTG GAGCTGACGG CCACTCCGGA GCAGTTTCCG 4801 CCGGGAAACA CTGGACTGTG GAGAGATCGG TCGTAGGGGT CCAGGTCGGC GACAGATGGG 4861 GAAATGATGA CCAGGCTCTC TTTTGTGGTC TTCACAGTGC GCAGCCAATG ATAGTCTGGG 4921 TAAGGATTGT GCAGGCTTTC CTCATAGCGG GGGTCGCCAG CCATCTTCCA GTTGTAAGCT 4981 GCCCGACAGG CGTCTGGTGT TGGCCGAAAG TGTTTTCTCT TGAAAGTTGT GGTGACATAT 5041 CCCACAAAAT TTGTGTAGGT TTCTGCCTCG GTGACCACAC CAGTGCATGT GAACCCGTTC 5101 ATCTTAATAG CAGAGATATA GCCCACTTTC AGCTCCATGT AGGAGAATCC GCTCAGGTTG 5161 GTACAGCCTT CGTCCTCGAC CACGAGATTG TTAGGGCATG ACAGATGGTG AATATCGATA 5221 GGACTCCAGG GGCCCAGCTT GTCGGGGATA GTGTAGATAG GGAATTTACC AAAGCAGAGT 5281 GGGAAGACGA GCAGAGGGAC GAAGAGGAGA GCCTGTGGGA CCATggtggc ggcggtaccg 5341 aattctagta taacttcgta taggatactt tatacgaagt tatcattggg attcttccta 5401 ttttgatcca agcatcacca tcgaccctct agtccagatc tcaccatcga cccataactt 5461 cgtatagcat acattatacg aagttatgtc cctcgaagag gttcgaattc gatatcaagc 5521 ttatcgataa tcaacctctg gattacaaaa tttgtgaaag attgactggt attcttaact 5581 atgttgctcc ttttacgcta tgtggatacg ctgctttaat gcctttgtat catgctattg 5641 cttcccgtat ggctttcatt ttctcctcct tgtataaatc ctggttgctg tctctttatg 5701 aggagttgtg gcccgttgtc aggcaacgtg gcgtggtgtg cactgtgttt gctgacgcaa 5761 cccccactgg ttggggcatt gccaccacct gtcagctcct ttccgggact ttcgctttcc 5821 ccctccctat tgccacggcg gaactcatcg ccgcctgcct tgcccgctgc tggacagggg 5881 ctcggctgtt gggcactgac aattccgtgg tgttgtcggg gaaatcatcg tcctttcctt 5941 ggctgctcgc ctgtgttgcc acctggattc tgcgcgggac gtccttctgc tacgtccctt 6001 cggccctcaa tccagcggac cttccttccc gcggcctgct gccggctctg cggcctcttc 6061 cgcgtcttcg ccttcgccct cagacgagtc ggatctccct ttgggccgcc tccccgcatc 6121 gataccgtcg acccgggcgg ccgcttcgag cagacatgat aagatacatt gatgagtttg 6181 gacaaaccac aactagaatg cagtgaaaaa aatgctttat ttgtgaaatt tgtgatgcta 6241 ttgctttatt tgtaaccatt ataagctgca ataaacaagt taacaacaac aattgcattc 6301 attttatgtt tcaggttcag ggggagatgt gggaggtttt ttaaagcaag taaaacctct 6361 acaaatgtgg taaaatcgat aaggatcttc ctagagcatg gctacgtaga taagtagcat 6421 ggcgggttaa tcattaacta caaggaaccc ctagtgatgg agttggccac tccctctctg 6481 cgcgctcgct cgctcactga ggccgggcga ccaaaggtcg cccgacgccc gggctttgcc 6541 cgggcggcct cagtgagcga gcgagcgcgc agctgcatta atgaatcggc caacgcgcgg 6601 ggagaggcgg tttgcgtatt gggcgct //