LOCUS F1vLmCherryRab5_ 10640 bp ds-DNA circular 05-MAR-2013 SOURCE ORGANISM COMMENT COMMENT ApEinfo:methylated:1 FEATURES Location/Qualifiers enhancer 10049..10640 /vntifkey="9" /label=WPRE /ApEinfo_fwdcolor=pink /ApEinfo_revcolor=pink /ApEinfo_graphicformat=arrow_data {{0 1 2 0 0 -1} {} 0} width 5 offset 0 misc_feature 9347..9366 /vntifkey="21" /label=HA\tag /ApEinfo_fwdcolor=#808040 /ApEinfo_revcolor=#ff0000 /ApEinfo_graphicformat=arrow_data {{0 1 2 0 0 -1} {} 0} width 5 offset 0 promoter 7730..8223 /vntifkey="29" /label=SFFV /ApEinfo_fwdcolor=pink /ApEinfo_revcolor=pink /ApEinfo_graphicformat=arrow_data {{0 1 2 0 0 -1} {} 0} width 5 offset 0 misc_feature 9367..9987 /label=Rab7a /ApEinfo_fwdcolor=cyan /ApEinfo_revcolor=green /ApEinfo_graphicformat=arrow_data {{0 1 2 0 0 -1} {} 0} width 5 offset 0 repeat_region 7518..7697 /vntifkey="34" /label=cPPT /ApEinfo_fwdcolor=pink /ApEinfo_revcolor=pink /ApEinfo_graphicformat=arrow_data {{0 1 2 0 0 -1} {} 0} width 5 offset 0 CDS 1231..2091 /vntifkey="4" /label=bla\(AmpR) /ApEinfo_fwdcolor=#0000ff /ApEinfo_revcolor=#0000ff /ApEinfo_graphicformat=arrow_data {{0 1 2 0 0 -1} {} 0} width 5 offset 0 primer 8148..8171 /vntifkey="27" /label=1166_seq /ApEinfo_fwdcolor=pink /ApEinfo_revcolor=pink /ApEinfo_graphicformat=arrow_data {{0 1 2 0 0 -1} {} 0} width 5 offset 0 primer 10040..10062 /vntifkey="27" /label=1167_seq /ApEinfo_fwdcolor=pink /ApEinfo_revcolor=pink /ApEinfo_graphicformat=arrow_data {{0 1 2 0 0 -1} {} 0} width 5 offset 0 misc_feature 8263..8586 /vntifkey="21" /label=F1v\(FKBP36V) /ApEinfo_fwdcolor=#808040 /ApEinfo_revcolor=#ff0000 /ApEinfo_graphicformat=arrow_data {{0 1 2 0 0 -1} {} 0} width 5 offset 0 misc_feature 8611..9318 /vntifkey="21" /label=mCherry /ApEinfo_fwdcolor=#808040 /ApEinfo_revcolor=#ff0000 /ApEinfo_graphicformat=arrow_data {{0 1 2 0 0 -1} {} 0} width 5 offset 0 misc_feature 9328..9346 /vntifkey="21" /label=HA\tag(1) /ApEinfo_label=HA\tag /ApEinfo_fwdcolor=#808040 /ApEinfo_revcolor=#ff0000 /ApEinfo_graphicformat=arrow_data {{0 1 2 0 0 -1} {} 0} width 5 offset 0 misc_feature 8587..8610 /vntifkey="21" /label=longer\linker /ApEinfo_fwdcolor=#808040 /ApEinfo_revcolor=#ff0000 /ApEinfo_graphicformat=arrow_data {{0 1 2 0 0 -1} {} 0} width 5 offset 0 ORIGIN 1 cgataccgtc gaccaaggca gctgtagatc ttagccactt tttaaaagaa aaggggggac 61 tggaagggct aattcactcc caacgaagac aagatctgct ttttgcttgt actgggtctc 121 tctggttaga ccagatctga gcctgggagc tctctggcta actagggaac ccactgctta 181 agcctcaata aagcttgcct tgagtgcttc aagtagtgtg tgcccgtctg ttgtgtgact 241 ctggtaacta gagatccctc agaccctttt agtcagtgtg gaaaatctct agcagcatct 301 agaattaatt ccgtgtattc tatagtgtca cctaaatcgt atgtgtatga tacataaggt 361 tatgtattaa ttgtagccgc gttctaacga caatatgtac aagcctaatt gtgtagcatc 421 tggcttactg aagcagaccc tatcatctct ctcgtaaact gccgtcagag tcggtttggt 481 tggacgaacc ttctgagttt ctggtaacgc cgtcccgcac ccggaaatgg tcagcgaacc 541 aatcagcagg gtcatcgcta gccagatcct ctacgccgga cgcatcgtgg ccggcatcac 601 cggcgccaca ggtgcggttg ctggcgccta tatcgccgac atcaccgatg gggaagatcg 661 ggctcgccac ttcgggctca tgagcgcttg tttcggcgtg ggtatggtgg caggccccgt 721 ggccggggga ctgttgggcg ccatctcctt gcatgcacca ttccttgcgg cggcggtgct 781 caacggcctc aacctactac tgggctgctt cctaatgcag gagtcgcata agggagagcg 841 tcgaatggtg cactctcagt acaatctagc tctgatgccg catagttaag ccagccccga 901 cacccgccaa cacccgctga cgcgccctga cgggcttgtc tgctcccggc atccgcttac 961 agacaagctg tgaccgtctc cgggagctgc atgtgtcaga ggttttcacc gtcatcaccg 1021 aaacgcgcga gacgaaaggg cctcgtgata cgcctatttt tataggttaa tgtcatgata 1081 ataatggttt cttagacgtc aggtggcact tttcggggaa atgtgcgcgg aacccctatt 1141 tgtttatttt tctaaataca ttcaaatatg tatccgctca tgagacaata accctgataa 1201 atgcttcaat aatattgaaa aaggaagagt atgagtattc aacatttccg tgtcgccctt 1261 attccctttt ttgcggcatt ttgccttcct gtttttgctc acccagaaac gctggtgaaa 1321 gtaaaagatg ctgaagatca gttgggtgca cgagtgggtt acatcgaact ggatctcaac 1381 agcggtaaga tccttgagag ttttcgcccc gaagaacgtt ttccaatgat gagcactttt 1441 aaagttctgc tatgtggcgc ggtattatcc cgtattgacg ccgggcaaga gcaactcggt 1501 cgccgcatac actattctca gaatgacttg gttgagtact caccagtcac agaaaagcat 1561 cttacggatg gcatgacagt aagagaatta tgcagtgctg ccataaccat gagtgataac 1621 actgcggcca acttacttct gacaacgatc ggaggaccga aggagctaac cgcttttttg 1681 cacaacatgg gggatcatgt aactcgcctt gatcgttggg aaccggagct gaatgaagcc 1741 ataccaaacg acgagcgtga caccacgatg cctgtagcaa tggcaacaac gttgcgcaaa 1801 ctattaactg gcgaactact tactctagct tcccggcaac aattaataga ctggatggag 1861 gcggataaag ttgcaggacc acttctgcgc tcggcccttc cggctggctg gtttattgct 1921 gataaatctg gagccggtga gcgtgggtct cgcggtatca ttgcagcact ggggccagat 1981 ggtaagccct cccgtatcgt agttatctac acgacgggga gtcaggcaac tatggatgaa 2041 cgaaatagac agatcgctga gataggtgcc tcactgatta agcattggta actgtcagac 2101 caagtttact catatatact ttagattgat ttaaaacttc atttttaatt taaaaggatc 2161 taggtgaaga tcctttttga taatctcatg accaaaatcc cttaacgtga gttttcgttc 2221 cactgagcgt cagaccccgt agaaaagatc aaaggatctt cttgagatcc tttttttctg 2281 cgcgtaatct gctgcttgca aacaaaaaaa ccaccgctac cagcggtggt ttgtttgccg 2341 gatcaagagc taccaactct ttttccgaag gtaactggct tcagcagagc gcagatacca 2401 aatactgtcc ttctagtgta gccgtagtta ggccaccact tcaagaactc tgtagcaccg 2461 cctacatacc tcgctctgct aatcctgtta ccagtggctg ctgccagtgg cgataagtcg 2521 tgtcttaccg ggttggactc aagacgatag ttaccggata aggcgcagcg gtcgggctga 2581 acggggggtt cgtgcacaca gcccagcttg gagcgaacga cctacaccga actgagatac 2641 ctacagcgtg agctatgaga aagcgccacg cttcccgaag ggagaaaggc ggacaggtat 2701 ccggtaagcg gcagggtcgg aacaggagag cgcacgaggg agcttccagg gggaaacgcc 2761 tggtatcttt atagtcctgt cgggtttcgc cacctctgac ttgagcgtcg atttttgtga 2821 tgctcgtcag gggggcggag cctatggaaa aacgccagca acgcggcctt tttacggttc 2881 ctggcctttt gctggccttt tgctcacatg ttctttcctg cgttatcccc tgattctgtg 2941 gataaccgta ttaccgcctt tgagtgagct gataccgctc gccgcagccg aacgaccgag 3001 cgcagcgagt cagtgagcga ggaagcggaa gagcgcccaa tacgcaaacc gcctctcccc 3061 gcgcgttggc cgattcatta atgcagctgt ggaatgtgtg tcagttaggg tgtggaaagt 3121 ccccaggctc cccagcaggc agaagtatgc aaagcatgca tctcaattag tcagcaacca 3181 ggtgtggaaa gtccccaggc tccccagcag gcagaagtat gcaaagcatg catctcaatt 3241 agtcagcaac catagtcccg cccctaactc cgcccatccc gcccctaact ccgcccagtt 3301 ccgcccattc tccgccccat ggctgactaa ttttttttat ttatgcagag gccgaggccg 3361 cctcggcctc tgagctattc cagaagtagt gaggaggctt ttttggaggc ctaggctttt 3421 gcaaaaagct tggacacaag acaggcttgc gagatatgtt tgagaatacc actttatccc 3481 gcgtcaggga gaggcagtgc gtaaaaagac gcggactcat gtgaaatact ggtttttagt 3541 gcgccagatc tctataatct cgcgcaacct attttcccct cgaacacttt ttaagccgta 3601 gataaacagg ctgggacact tcacatgagc gaaaaataca tcgtcacctg ggacatgttg 3661 cagatccatg cacgtaaact cgcaagccga ctgatgcctt ctgaacaatg gaaaggcatt 3721 attgccgtaa gccgtggcgg tctgtaccgg gtgcgttact ggcgcgtgaa ctgggtattc 3781 gtcatgtcga taccgtttgt atttccagct acgatcacga caaccagcgc gagcttaaag 3841 tgctgaaacg cgcagaaggc gatggcgaag gcttcatcgt tattgatgac ctggtggata 3901 ccggtggtac tgcggttgcg attcgtgaaa tgtatccaaa agcgcacttt gtcaccatct 3961 tcgcaaaacc ggctggtcgt ccgctggttg atgactatgt tgttgatatc ccgcaagata 4021 cctggattga acagccgtgg gatatgggcg tcgtattcgt cccgccaatc tccggtcgct 4081 aatcttttca acgcctggca ctgccgggcg ttgttctttt taacttcagg cgggttacaa 4141 tagtttccag taagtattct ggaggctgca tccatgacac aggcaaacct gagcgaaacc 4201 ctgttcaaac cccgctttaa acatcctgaa acctcgacgc tagtccgccg ctttaatcac 4261 ggcgcacaac cgcctgtgca gtcggccctt gatggtaaaa ccatccctca ctggtatcgc 4321 atgattaacc gtctgatgtg gatctggcgc ggcattgacc cacgcgaaat cctcgacgtc 4381 caggcacgta ttgtgatgag cgatgccgaa cgtaccgacg atgatttata cgatacggtg 4441 attggctacc gtggcggcaa ctggatttat gagtgggccc cggatctttg tgaaggaacc 4501 ttacttctgt ggtgtgacat aattggacaa actacctaca gagatttaaa gctctaaggt 4561 aaatataaaa tttttaagtg tataatgtgt taaactactg attctaattg tttgtgtatt 4621 ttagattcca acctatggaa ctgatgaatg ggagcagtgg tggaatgcct ttaatgagga 4681 aaacctgttt tgctcagaag aaatgccatc tagtgatgat gaggctactg ctgactctca 4741 acattctact cctccaaaaa agaagagaaa ggtagaagac cccaaggact ttccttcaga 4801 attgctaagt tttttgagtc atgctgtgtt tagtaataga actcttgctt gctttgctat 4861 ttacaccaca aaggaaaaag ctgcactgct atacaagaaa attatggaaa aatattctgt 4921 aacctttata agtaggcata acagttataa tcataacata ctgttttttc ttactccaca 4981 caggcataga gtgtctgcta ttaataacta tgctcaaaaa ttgtgtacct ttagcttttt 5041 aatttgtaaa ggggttaata aggaatattt gatgtatagt gccttgacta gagatcataa 5101 tcagccatac cacatttgta gaggttttac ttgctttaaa aaacctccca cacctccccc 5161 tgaacctgaa acataaaatg aatgcaattg ttgttgttaa cttgtttatt gcagcttata 5221 atggttacaa ataaagcaat agcatcacaa atttcacaaa taaagcattt ttttcactgc 5281 attctagttg tggtttgtcc aaactcatca atgtatctta tcatgtctgg atcaactgga 5341 taactcaagc taaccaaaat catcccaaac ttcccacccc ataccctatt accactgcca 5401 attacctagt ggtttcattt actctaaacc tgtgattcct ctgaattatt ttcattttaa 5461 agaaattgta tttgttaaat atgtactaca aacttagtag ttggaagggc taattcactc 5521 ccaaagaaga caagatatcc ttgatctgtg gatctaccac acacaaggct acttccctga 5581 ttagcagaac tacacaccag ggccaggggt cagatatcca ctgacctttg gatggtgcta 5641 caagctagta ccagttgagc cagataaggt agaagaggcc aataaaggag agaacaccag 5701 cttgttacac cctgtgagcc tgcatgggat ggatgacccg gagagagaag tgttagagtg 5761 gaggtttgac agccgcctag catttcatca cgtggcccga gagctgcatc cggagtactt 5821 caagaactgc tgatatcgag cttgctacaa gggactttcc gctggggact ttccagggag 5881 gcgtggcctg ggcgggactg gggagtggcg agccctcaga tcctgcatat aagcagctgc 5941 tttttgcctg tactgggtct ctctggttag accagatctg agcctgggag ctctctggct 6001 aactagggaa cccactgctt aagcctcaat aaagcttgcc ttgagtgctt caagtagtgt 6061 gtgcccgtct gttgtgtgac tctggtaact agagatccct cagacccttt tagtcagtgt 6121 ggaaaatctc tagcagtggc gcccgaacag ggacttgaaa gcgaaaggga aaccagagga 6181 gctctctcga cgcaggactc ggcttgctga agcgcgcacg gcaagaggcg aggggcggcg 6241 actggtgagt acgccaaaaa ttttgactag cggaggctag aaggagagag atgggtgcga 6301 gagcgtcagt attaagcggg ggagaattag atcgcgatgg gaaaaaattc ggttaaggcc 6361 agggggaaag aaaaaatata aattaaaaca tatagtatgg gcaagcaggg agctagaacg 6421 attcgcagtt aatcctggcc tgttagaaac atcagaaggc tgtagacaaa tactgggaca 6481 gctacaacca tcccttcaga caggatcaga agaacttaga tcattatata atacagtagc 6541 aaccctctat tgtgtgcatc aaaggataga gataaaagac accaaggaag ctttagacaa 6601 gatagaggaa gagcaaaaca aaagtaagac caccgcacag caagcggccg gtgatcttca 6661 gacctggacg atatatatga gggacaattg gagaagtgaa ttatataaat ataaagtagt 6721 aaaaattgaa ccattaggag tagcacccac caaggcaaag agaagagtgg tgcagagaga 6781 aaaaagagca gtgggaatag gagctttgtt ccttgggttc ttgggagcag caggaagcac 6841 tatgggcgca gcgtcaatga cgctgacggt acaggccaga caattattgt ctggtatagt 6901 gcagcagcag aacaatttgc tgagggctat tgaggcgcaa cagcatctgt tgcaactcac 6961 agtctggggc atcaagcagc tccaggcaag aatcctggct gtggaaagat acctaaagga 7021 tcaacagctc ctggggattt ggggttgctc tggaaaactc atttgcacca ctgctgtgcc 7081 ttggaatgct agttggagta ataaatctct ggaacagatt tggaatcaca cgacctggat 7141 ggagtgggac agagaaatta acaattacac aagcttaata cactccttaa ttgaagaatc 7201 gcaaaaccag caagaaaaga atgaacaaga attattggaa ttagataaat gggcaagttt 7261 gtggaattgg tttaacataa caaattggct gtggtatata aaattattca taatgatagt 7321 aggaggcttg gtaggtttaa gaatagtttt tgctgtactt tctatagtga atagagttag 7381 gcagggatat tcaccattat cgtttcagac ccacctccca accccgaggg gacccgacag 7441 gcccgaagga atagaagaag aaggtggaga gagagacaga gacagatcca ttcgattagt 7501 gaacggatct cgacggtcgc caaatggcag tattcatcca caattttaaa agaaaagggg 7561 ggattggggg gtacagtgca ggggaaagaa tagtagacat aatagcaaca gacatacaaa 7621 ctaaagaatt acaaaaacaa attacaaaaa ttcaaaattt tcgggtttat tacagggaca 7681 gcagagatcc agtttggatc gataagcttg atatcgaatt cctgcagccc cgataaaata 7741 aaagatttta tttagtctcc agaaaaaggg gggaatgaaa gaccccacct gtaggttatg 7801 gcaagctagc tgcagtaacg ccattattgc aaggcatgga aaaataccaa accaagaata 7861 gagaagttca gatcaagggc gggtacatga aaatagctaa cgtagggcca aacaggatat 7921 ctgcggtgag cagtttcggc cccggcccgg ggccaagaac agatggtcac cgcagtttcg 7981 gccccggccc gaggccaaga gcagatggtc cccagatatg gcccaaccct cagcagtttc 8041 ttaagaccca tcagatgttt ccaggctccc ccaaggacct gaaatgaccc tgcgccttat 8101 ttgaattaac caatcagcct gcttctcgct tctgttcgcg cgcttctgct tcccgagctc 8161 tataaaagag ctcacaaccc ctcactcggc gcgccagtcc tccgacagac tgagtcgccc 8221 gggggggatc tggagctctc gagaattctc acgcgtgcca ccatgggagt gcaggtggag 8281 actatctccc caggagacgg gcgcaccttc cccaagcgcg gccagacctg cgtggtgcac 8341 tacaccggga tgcttgaaga tggaaagaaa tttgattcct cccgggacag aaacaagccc 8401 tttaagttta tgctaggcaa gcaggaggtg atccgaggct gggaagaagg ggttgcccag 8461 atgagtgtgg gtcagagagc caaactgact atatctccag attatgccta tggtgccact 8521 gggcacccag gcatcatccc accacatgcc actctcgtct tcgatgtgga gcttctaaaa 8581 ctggaaggtg ctgcacttct gcccggttct atggtgagca agggcgagga ggataacatg 8641 gccatcatca aggagttcat gcgcttcaag gtgcacatgg agggctccgt gaacggccac 8701 gagttcgaga tcgagggcga gggcgagggc cgcccctacg agggcaccca gaccgccaag 8761 ctgaaggtga ccaagggtgg ccccctgccc ttcgcctggg acatcctgtc ccctcagttc 8821 atgtacggct ccaaggccta cgtgaagcac cccgccgaca tccccgacta cttgaagctg 8881 tccttccccg agggcttcaa gtgggagcgc gtgatgaact tcgaggacgg cggcgtggtg 8941 accgtgaccc aggactcctc cctgcaggac ggcgagttca tctacaaggt gaagctgcgc 9001 ggcaccaact tcccctccga cggccccgta atgcagaaga agaccatggg ctgggaggcc 9061 tcctccgagc ggatgtaccc cgaggacggc gccctgaagg gcgagatcaa gcagaggctg 9121 aagctgaagg acggcggcca ctacgacgct gaggtcaaga ccacctacaa ggccaagaag 9181 cccgtgcagc tgcccggcgc ctacaacgtc aacatcaagt tggacatcac ctcccacaac 9241 gaggactaca ccatcgtgga acagtacgaa cgcgccgagg gccgccactc caccggcggc 9301 atggacgagc tgtacaagcc cggttctgcc gccatggcat atccatatga cgtcccagac 9361 tatgctATGA CCTCTAGGAA GAAAGTGTTG CTGAAGGTTA TCATCCTGGG AGATTCTGGA 9421 GTCGGGAAGA CATCACTCAT GAACCAGTAT GTGAATAAGA AATTCAGCAA TCAGTACAAA 9481 GCCACAATAG GAGCTGACTT TCTGACCAAG GAGGTGATGG TGGATGACAG GCTAGTCACA 9541 ATGCAGATAT GGGACACAGC AGGACAGGAA CGGTTCCAGT CTCTCGGTGT GGCCTTCTAC 9601 AGAGGTGCAG ACTGCTGCGT TCTGGTATTT GATGTGACTG CCCCCAACAC ATTCAAAACC 9661 CTAGATAGCT GGAGAGATGA GTTTCTCATC CAGGCCAGTC CCCGAGATCC TGAAAACTTC 9721 CCATTTGTTG TGTTGGGAAA CAAGATTGAC CTCGAAAACA GACAAGTGGC CACAAAGCGG 9781 GCACAGGCCT GGTGCTACAG CAAAAACAAC ATTCCCTACT TTGAGACCAG TGCCAAGGAG 9841 GCCATCAACG TGGAGCAGGC GTTCCAGACG ATTGCACGGA ATGCACTTAA GCAGGAAACG 9901 GAGGTGGAGC TGTACAACGA ATTTCCTGAA CCTATCAAAC TGGACAAGAA TGACCGGGCC 9961 AAGGCCTCGG CAGAAAGCTG CAGTTGCtaa gcggccgcga ctctagagtc gacctgcagg 10021 catgcaagct tgatatcaag cttatcgata atcaacctct ggattacaaa atttgtgaaa 10081 gattgactgg tattcttaac tatgttgctc cttttacgct atgtggatac gctgctttaa 10141 tgcctttgta tcatgctatt gcttcccgta tggctttcat tttctcctcc ttgtataaat 10201 cctggttgct gtctctttat gaggagttgt ggcccgttgt caggcaacgt ggcgtggtgt 10261 gcactgtgtt tgctgacgca acccccactg gttggggcat tgccaccacc tgtcagctcc 10321 tttccgggac tttcgctttc cccctcccta ttgccacggc ggaactcatc gccgcctgcc 10381 ttgcccgctg ctggacaggg gctcggctgt tgggcactga caattccgtg gtgttgtcgg 10441 ggaaatcatc gtcctttcct tggctgctcg cctgtgttgc cacctggatt ctgcgcggga 10501 cgtccttctg ctacgtccct tcggccctca atccagcgga ccttccttcc cgcggcctgc 10561 tgccggctct gcggcctctt ccgcgtcttc gccttcgccc tcagacgagt cggatctccc 10621 tttgggccgc ctccccgcat //