LOCUS 87426_AICSDP-7:S 2680 bp DNA linear UNA 12-APR-2018 DEFINITION A new nucleotide sequence entered manually. ACCESSION urn.local.amandah.bx-8w3x6s1 VERSION urn.local.amandah.bx-8w3x6s1 KEYWORDS . SOURCE ORGANISM . FEATURES Location/Qualifiers source <1..>997 /organism="Homo sapiens" /mol_type="genomic DNA" /db_xref="taxon:9606" /chromosome=9 /label="source Homo sapiens" gene complement(<1..598) /gene="ALG2" /gene_synonym="CDG1I; CDGIi; CMS14; CMSTA3; hALPG2; NET38" /note="ALG2, alpha-1,3/1,6-mannosyltransferase; Derived byautomated computational analysis using gene predictionmethod: BestRefSeq." /db_xref="GeneID:85365" /db_xref="HGNC:HGNC:23159" /db_xref="MIM:607905" /label="ALG2 gene" CDS complement(<181..528) /gene="ALG2" /gene_synonym="CDG1I; CDGIi; CMS14; CMSTA3; hALPG2; NET38" /note="Derived by automated computational analysis using gene prediction method: BestRefSeq." /codon_start=1 /product="alpha-1,3/1,6-mannosyltransferase ALG2" /protein_id="NP_149078.1" /db_xref="CCDS:CCDS6739.1" /db_xref="GeneID:85365" /db_xref="HGNC:HGNC:23159" /db_xref="MIM:607905" /translation="MAEEQGRERDSVPKPSVLFLHPDLGVGGAERLVLDAALALQARG CSVKIWTAHYDPGHCFAESRELPVRCAGDWLPRGLGWGGRGAAVCAYVRMVFLALYVL FLADEEFDVVVCDQVSACIPVFRLARRRKKILFYCHFPDLLLTKRDSFLKRLYRAPID WIEEYTTGMADCILVNSQFTAAVFKETFKSLSHIDPDVLYPSLNVTSFDSVVPEKLDD LVPKGKKFLLLSINRYERKKNLTLALEALVQLRGRLTSQDWERVHLIVAGGYDERVLE NVEHYQELKKMVQQSDLGQYVTFLRSFSDKQKISLLHSCTCVLYTPSNEHFGIVPLEA MYMQCPVIAVNSGGPLESIDHSVTGFLCEPDPVHFSEAIEKFIREPSLKATMGLAGRA RVKEKFSPEAFTEQLYRYVTKLLV" /label="ALG2 CDS" mRNA complement(<181..598) /gene="ALG2" /gene_synonym="CDG1I; CDGIi; CMS14; CMSTA3; hALPG2; NET38" /product="ALG2, alpha-1,3/1,6-mannosyltransferase, transcript variant 1" /note="Derived by automated computational analysis using gene prediction method: BestRefSeq." /transcript_id="NM_033087.3" /db_xref="GeneID:85365" /db_xref="HGNC:HGNC:23159" /db_xref="MIM:607905" /label="ALG2 mRNA" misc_RNA complement(181..598) /gene="ALG2" /gene_synonym="CDG1I; CDGIi; CMS14; CMSTA3; hALPG2; NET38" /product="ALG2, alpha-1,3/1,6-mannosyltransferase, transcript variant 2" /note="Derived by automated computational analysis using gene prediction method: BestRefSeq." /transcript_id="NR_024532.1" /db_xref="GeneID:85365" /db_xref="HGNC:HGNC:23159" /db_xref="MIM:607905" /label="ALG2 RNA" gene 922..>997 /gene="SEC61B" /note="Sec61 translocon beta subunit; Derived by automatedcomputational analysis using gene prediction method:BestRefSeq." /db_xref="GeneID:10952" /db_xref="HGNC:HGNC:16993" /db_xref="MIM:609214" /label="SEC61B gene" mRNA 922..>997 /gene="SEC61B" /product="Sec61 translocon beta subunit" /note="Derived by automated computational analysis using gene prediction method: BestRefSeq." /transcript_id="NM_006808.2" /db_xref="GeneID:10952" /db_xref="HGNC:HGNC:16993" /db_xref="MIM:609214" /label="SEC61B mRNA" misc_RNA 984..>997 /created_by="User" /label="crRNA1 Binding Site" modified_base 985 /created_by="User" /label="C to A" misc_RNA complement(988..>997) /created_by="User" /label="crRNA2 Binding Site" ORF 998..1714 /created_by="User" /modified_by="User" /label="mEGFP" misc_feature 1715..1729 /created_by="User" /modified_by="User" /label="SGLRS Linker" CDS join(1730..1732,1912..2009) /gene="SEC61B" /note="Derived by automated computational analysis using gene prediction method: BestRefSeq." /codon_start=1 /product="protein transport protein Sec61 subunit beta" /protein_id="NP_006799.1" /db_xref="CCDS:CCDS6741.1" /db_xref="GeneID:10952" /db_xref="HGNC:HGNC:16993" /db_xref="MIM:609214" /translation="MPGPTPSGTNVGSSGRSPSKAVAARAAGSTVRQRKNASCGTRSA GRTTSAGTGGMWRFYTEDSPGLKVGPVPVLVMSLLFIASVFMLHIWGKYTRS" /label="SEC61B CDS" source <1730..>2680 /organism="Homo sapiens" /mol_type="genomic DNA" /db_xref="taxon:9606" /chromosome=9 /label="source Homo sapiens" gene <1730..>2680 /gene="SEC61B" /note="Sec61 translocon beta subunit; Derived by automatedcomputational analysis using gene prediction method:BestRefSeq." /db_xref="GeneID:10952" /db_xref="HGNC:HGNC:16993" /db_xref="MIM:609214" /label="SEC61B gene" mRNA join(<1730..1732,1912..2009) /gene="SEC61B" /product="Sec61 translocon beta subunit" /note="Derived by automated computational analysis using gene prediction method: BestRefSeq." /transcript_id="NM_006808.2" /db_xref="GeneID:10952" /db_xref="HGNC:HGNC:16993" /db_xref="MIM:609214" /label="SEC61B mRNA" misc_RNA complement(<1730..1739) /created_by="User" /label="crRNA2 Binding Site" misc_RNA <1730..1735 /created_by="User" /label="crRNA1 Binding Site" ORIGIN 1 tttaaatggg cccacactaa agttagagaa ccacaggctc gctcacaacc ctgacttctc 61 catgtcagtt ccgatctttg cgaaccgcag acagggaagg tcttctctca ggggtcatgc 121 ccgcggccgc cctccacggc gaggtccgca ctcgcgcagc cggccccgcg gccgcctcac 181 ctggtcgcac actaccacgt cgaactcctc gtcggcgagg aacagcacgt agagcgccag 241 gaaaaccatg cgcacgtagg cgcagacggc ggcgccgcgg ccgccccagc ccaggcctcg 301 cggcagccag tccccggcac agcgcaccgg tagctcgcgg ctctcggcga aacagtggcc 361 cgggtcgtag tgcgctgtcc agatcttcac gctacacccg cgcgcctgca gcgccagcgc 421 cgcgtccaac accagccgct cagcgccgcc cacgcccagg tctgggtgga ggaacagcac 481 cgacggcttg ggaaccgagt cccgttcccg gccctgctcc tccgccatgg ccctggagcc 541 gcaactgcac cccgcaccct gatgggggtc ttctgcgcaa gctccgcgct cgtagctccc 601 agctggccac tgcgggccga ccccgccctg ccgtacgtgc gtcagttagg ccacatcagc 661 gcaaatctgt gagggtctag taactgcctg agaaaatatc ttgtctgacc ccggttatat 721 ttttccttcg gtagggattg gactttctga aggacgttgt gatccaaagg aaggaggccg 781 gaggtctcta cttcccatac agcaggtaac taagttgtct gtagcagact gtctacaggc 841 atatcgtgag acgacccagg cgtccctggg gtcagagagg accttgcctg caagtccggg 901 ggcggggcct gagtcagtct cgccagctgc cggtctttcg ggggctccgt aactttctat 961 ccgtccgcgt cagcgccttg ccacactcat ctccaatatg gtgagcaagg gcgaggagct 1021 gttcaccggg gtggtgccca tcctggtcga gctggacggc gacgtaaacg gccacaagtt 1081 cagcgtgtcc ggcgagggcg agggcgatgc cacctacggc aagctgaccc tgaagttcat 1141 ctgcaccacc ggcaagctgc ccgtgccctg gcccaccctc gtgaccaccc tgacctacgg 1201 cgtgcagtgc ttcagccgct accccgacca catgaagcag cacgacttct tcaagtccgc 1261 catgcccgaa ggctacgtcc aggagcgcac catcttcttc aaggacgacg gcaactacaa 1321 gacccgcgcc gaggtgaagt tcgagggcga caccctggtg aaccgcatcg agctgaaggg 1381 catcgacttc aaggaggacg gcaacatcct ggggcacaag ctggagtaca actacaacag 1441 ccacaacgtc tatatcatgg ccgacaagca gaagaacggc atcaaggtga acttcaagat 1501 ccgccacaac atcgaggacg gcagcgtgca gctcgccgac cactaccagc agaacacccc 1561 catcggcgac ggccccgtgc tgctgcccga caaccactac ctgagcaccc agtccaagct 1621 gagcaaagac cccaacgaga agcgcgatca catggtcctg ctggagttcg tgaccgccgc 1681 cgggatcact ctcggcatgg acgagctgta caagagcggc ctgagaagca tggtatggcg 1741 gcccttccat gatccccgcc tctcccagaa gccctgactc ctcctgcttt gcgccgtgct 1801 tttcctctgt agctcccttg cttcccccag cctcgggtgt gggtgtctag gccggggttc 1861 tggggcaggc ctgccgcgct cacccgtctg tctgcttgtc tccctctaca gcctggtccg 1921 acccccagtg gcactaacgt gggatcctca gggcgctctc ccagcaaagc agtggccgcc 1981 cgggcggcgg gatccactgt ccggcagagg taaggaaccc tgcagttcgt tcgcttccag 2041 actcggagat aggacccaga acctcgctga ttctggggtg gagaccctag catgtgaaga 2101 ttgacaaagg caaaatgagc ttctagtgac gtggccgtgg gagtagttaa aggccttttg 2161 ggaggaaggc gacatttttt ttctcgttgc tcagtttagg gcactactct taaaaaagga 2221 aagttaacaa actggaatag agtcagagat aactttgaga aaaccgatgt cattaaactg 2281 gtgtctctgg acctgaggtt tgcactcaca tttccatctg gcggccccat aagcaatctg 2341 tcctacagat aactcgtcct acacaaaact tagtctcttt tcagctcagc tctctcactc 2401 tcaattatat ctccttactt ccatatggca ctgttgtaca ctcatttact cagagccaga 2461 aacgtcagcg tcatcttgga tttttcttat gctctttctc tctctagtca tatgccagac 2521 tttaaactct gcttgaaagc tttctcataa gctctttcct tttccctttc tactgctttg 2581 catttgctac ttaacccttt tcttcaggct gtttgctttc cagtccatcg ttcgctctgc 2641 tgttactctt ctgcgtagtt tctgttactt gttgctgaac //