LOCUS Exported 6840 bp ds-DNA circular SYN 12-MAY-2021 DEFINITION synthetic circular DNA ACCESSION . VERSION . KEYWORDS pDEST47-MCU-GFP SOURCE synthetic DNA construct ORGANISM synthetic DNA construct REFERENCE 1 (bases 1 to 6840) AUTHORS Baughman JM, Perocchi F, Girgis HS, Plovanich M, Belcher-Timme CA, Sancak Y, Bao XR, Strittmatter L, Goldberger O, Bogorad RL, Koteliansky V, Mootha VK TITLE Integrative genomics identifies MCU as an essential component of the mitochondrial calcium uniporter. JOURNAL Nature. 2011 Jun 19. ():. PUBMED 21685886 REFERENCE 2 (bases 1 to 6840) AUTHORS . TITLE Direct Submission JOURNAL Exported May 12, 2021 from SnapGene Server 1.1.58 http://www.snapgene.com FEATURES Location/Qualifiers source 1..6840 /organism="synthetic DNA construct" /mol_type="other DNA" enhancer 105..484 /label=CMV enhancer /note="human cytomegalovirus immediate early enhancer" promoter 485..688 /label=CMV promoter /note="human cytomegalovirus (CMV) immediate early promoter" primer_bind 639..659 /label=CMV-F /note="Human CMV immediate early promoter, forward primer" primer_bind 733..752 /label=T7 /note="T7 promoter, forward primer" promoter 733..751 /label=T7 promoter /note="promoter for bacteriophage T7 RNA polymerase" protein_bind 785..809 /gene="mutant version of attB" /label=attB1 /bound_moiety="BP Clonase(TM)" /note="recombination site for the Gateway(R) BP reaction" protein_bind complement(1863..1887) /gene="mutant version of attB" /label=attB2 /bound_moiety="BP Clonase(TM)" /note="recombination site for the Gateway(R) BP reaction" CDS 1901..2620 /codon_start=1 /product="Emerald GFP" /label=EmGFP /note="mammalian codon-optimized" /translation="MVSKGEELFTGVVPILVELDGDVNGHKFSVSGEGEGDATYGKLTL KFICTTGKLPVPWPTLVTTFTYGVQCFARYPDHMKQHDFFKSAMPEGYVQERTIFFKDD GNYKTRAEVKFEGDTLVNRIELKGIDFKEDGNILGHKLEYNYNSHKVYITADKQKNGIK VNFKTRHNIEDGSVQLADHYQQNTPIGDGPVLLPDNHYLSTQSALSKDPNEKRDHMVLL EFVTAAGITLGMDELYK" primer_bind complement(1946..1967) /label=EGFP-N /note="EGFP, reverse primer" primer_bind complement(2207..2226) /label=EXFP-R /note="For distinguishing EGFP variants, reverse primer" primer_bind 2554..2575 /label=EGFP-C /note="EGFP, forward primer" primer_bind complement(2648..2667) /label=TK-pA-R /note="Thymidine kinase polyA, reverse primer" polyA_signal 2692..2740 /label=HSV TK poly(A) signal /note="herpes simplex virus thymidine kinase polyadenylation signal (Cole and Stacy, 1985)" rep_origin 2942..3370 /direction=RIGHT /label=f1 ori /note="f1 bacteriophage origin of replication; arrow indicates direction of (+) strand synthesis" primer_bind complement(3029..3048) /label=F1ori-R /note="F1 origin, reverse primer" primer_bind 3239..3260 /label=F1ori-F /note="F1 origin, forward primer" primer_bind complement(3379..3399) /label=pBABE 3' /note="SV40 enhancer, reverse primer for pBABE vectors" promoter 3384..3713 /label=SV40 promoter /note="SV40 enhancer and early promoter" rep_origin 3564..3699 /label=SV40 ori /note="SV40 origin of replication" primer_bind 3626..3645 /label=SV40pro-F /note="SV40 promoter/origin, forward primer" promoter 3761..3808 /label=EM7 promoter /note="synthetic bacterial promoter " CDS 3827..4225 /codon_start=1 /gene="Aspergillus terreus BSD" /product="blasticidin S deaminase" /label=BSD /note="confers resistance to blasticidin" /translation="MAKPLSQEESTLIERATATINSIPISEDYSVASAALSSDGRIFTG VNVYHFTGGPCAELVVLGTAAAAAAGNLTCIVAIGNENRGILSPCGRCRQVLLDLHPGI KAIVKDSDGQPTAVGIRELLPSGYVWEG" polyA_signal 4383..4504 /label=SV40 poly(A) signal /note="SV40 polyadenylation signal" primer_bind complement(4420..4439) /label=SV40pA-R /note="SV40 polyA, reverse primer" primer_bind 4474..4493 /label=EBV-rev /note="SV40 polyA terminator, reverse primer" primer_bind complement(4553..4569) /label=M13 rev /note="common sequencing primer, one of multiple similar variants" primer_bind complement(4553..4569) /label=M13 Reverse /note="In lacZ gene. Also called M13-rev" primer_bind complement(4566..4588) /label=M13/pUC Reverse /note="In lacZ gene" protein_bind 4577..4593 /label=lac operator /bound_moiety="lac repressor encoded by lacI" /note="The lac repressor binds to the lac operator to inhibit transcription in E. coli. This inhibition can be relieved by adding lactose or isopropyl-beta-D-thiogalactopyranoside (IPTG)." promoter complement(4601..4631) /label=lac promoter /note="promoter for the E. coli lac operon" protein_bind 4646..4667 /label=CAP binding site /bound_moiety="E. coli catabolite activator protein" /note="CAP binding activates transcription in the presence of cAMP." primer_bind complement(4784..4801) /label=L4440 /note="L4440 vector, forward primer" rep_origin complement(4955..5543) /direction=LEFT /label=ori /note="high-copy-number ColE1/pMB1/pBR322/pUC origin of replication" primer_bind complement(5035..5054) /label=pBR322ori-F /note="pBR322 origin, forward primer" CDS complement(5714..6574) /codon_start=1 /gene="bla" /product="beta-lactamase" /label=AmpR /note="confers resistance to ampicillin, carbenicillin, and related antibiotics" /translation="MSIQHFRVALIPFFAAFCLPVFAHPETLVKVKDAEDQLGARVGYI ELDLNSGKILESFRPEERFPMMSTFKVLLCGAVLSRIDAGQEQLGRRIHYSQNDLVEYS PVTEKHLTDGMTVRELCSAAITMSDNTAANLLLTTIGGPKELTAFLHNMGDHVTRLDRW EPELNEAIPNDERDTTMPVAMATTLRKLLTGELLTLASRQQLIDWMEADKVAGPLLRSA LPAGWFIADKSGAGERGSRGIIAALGPDGKPSRIVVIYTTGSQATMDERNRQIAEIGAS LIKHW" primer_bind 6337..6356 /label=Amp-R /note="Ampicillin resistance gene, reverse primer" promoter complement(6575..6679) /gene="bla" /label=AmpR promoter primer_bind complement(6754..6773) /label=pRS-marker /note="pRS vectors, use to sequence yeast selectable marker" ORIGIN 1 ttaagctaca acaaggcaag gcttgaccga caattgcatg aagaatctgc ttagggttag 61 gcgttttgcg ctgcttcgcg atgtacgggc cagatatacg cgttgacatt gattattgac 121 tagttattaa tagtaatcaa ttacggggtc attagttcat agcccatata tggagttccg 181 cgttacataa cttacggtaa atggcccgcc tggctgaccg cccaacgacc cccgcccatt 241 gacgtcaata atgacgtatg ttcccatagt aacgccaata gggactttcc attgacgtca 301 atgggtggag tatttacggt aaactgccca cttggcagta catcaagtgt atcatatgcc 361 aagtacgccc cctattgacg tcaatgacgg taaatggccc gcctggcatt atgcccagta 421 catgacctta tgggactttc ctacttggca gtacatctac gtattagtca tcgctattac 481 catggtgatg cggttttggc agtacatcaa tgggcgtgga tagcggtttg actcacgggg 541 atttccaagt ctccacccca ttgacgtcaa tgggagtttg ttttggcacc aaaatcaacg 601 ggactttcca aaatgtcgta acaactccgc cccattgacg caaatgggcg gtaggcgtgt 661 acggtgggag gtctatataa gcagagctct ctggctaact agagaaccca ctgcttactg 721 gcttatcgaa attaatacga ctcactatag ggagacccaa gctggctagt taagctgagc 781 atcaacaagt ttgtacaaaa aagttggcat ggcggccgcc gcaggtagat cgctcctgct 841 gctcctctcc tctcggggcg gcggcggcgg gggcgccggc ggctgcgggg cgctgactgc 901 cggctgcttc cctgggctgg gcgtcagccg ccaccggcag cagcagcacc accggacggt 961 acaccagagg atcgcttcct ggcagaattt gggagctgtt tattgcagca ctgttgtgcc 1021 ctctgatgat gttacagtgg tttatcaaaa tgggttacct gtgatatctg tgaggctacc 1081 atcccggcgt gaacgctgtc agttcacact caagcctatc tctgactctg ttggtgtatt 1141 tttacgacaa ctgcaagaag aggatcgggg aattgacaga gttgctatct attcaccaga 1201 tggtgttcgc gttgctgctt caacaggaat agacctcctc ctccttgatg actttaagct 1261 ggtcattaat gacttaacat accacgtacg accaccaaaa agagacctct taagtcatga 1321 aaatgcagca acgctgaatg atgtaaagac attggtccag caactataca ccacactgtg 1381 cattgagcag caccagttaa acaaggaaag ggagcttatt gaaagactag aggatctcaa 1441 agagcagctg gctcccctgg aaaaggtacg aattgagatt agcagaaaag ctgagaagag 1501 gaccactttg gtgctatggg gtggccttgc ctacatggcc acacagtttg gcattttggc 1561 ccggcttacc tggtgggaat attcctggga catcatggag ccagtaacat acttcatcac 1621 ttatggaagt gccatggcaa tgtatgcata ttttgtaatg acacgccagg aatatgttta 1681 tccagaagcc agagacagac aatacttact atttttccat aaaggagcca aaaagtcacg 1741 ttttgaccta gagaaataca atcaactcaa ggatgcaatt gctcaggcag aaatggacct 1801 taagagactg agagacccat tacaagtaca tctgcctctc cgacaaattg gtgaaaaaga 1861 ttgcccaact ttcttgtaca aagtggttga tgctgttaac atggtgagca agggcgagga 1921 gctgttcacc ggggtggtgc ccatcctggt cgagctggac ggcgacgtaa acggccacaa 1981 gttcagcgtg tccggcgagg gcgagggcga tgccacctac ggcaagctga ccctgaagtt 2041 catctgcacc accggcaagc tgcccgtgcc ctggcccacc ctcgtgacca ccttcaccta 2101 cggcgtgcag tgcttcgccc gctaccccga ccacatgaag cagcacgact tcttcaagtc 2161 cgccatgccc gaaggctacg tccaggagcg caccatcttc ttcaaggacg acggcaacta 2221 caagacccgc gccgaggtga agttcgaggg cgacaccctg gtgaaccgca tcgagctgaa 2281 gggcatcgac ttcaaggagg acggcaacat cctggggcac aagctggagt acaactacaa 2341 cagccacaag gtctatatca ccgccgacaa gcagaagaac ggcatcaagg tgaacttcaa 2401 gacccgccac aacatcgagg acggcagcgt gcagctcgcc gaccactacc agcagaacac 2461 ccccatcggc gacggccccg tgctgctgcc cgacaaccac tacctgagca cccagtccgc 2521 cctgagcaaa gaccccaacg agaagcgcga tcacatggtc ctgctggagt tcgtgaccgc 2581 cgccgggatc actctcggca tggacgagct gtacaagtaa tgataagttt aaacggggga 2641 ggctaactga aacacggaag gagacaatac cggaaggaac ccgcgctatg acggcaataa 2701 aaagacagaa taaaacgcac gggtgttggg tcgtttgttc ataaacgcgg ggttcggtcc 2761 cagggctggc actctgtcga taccccaccg agaccccatt ggggccaata cgcccgcgtt 2821 tcttcctttt ccccacccca ccccccaagt tcgggtgaag gcccagggct cgcagccaac 2881 gtcggggcgg caggccctgc catagcagat ctgcgcagct ggggctctag ggggtatccc 2941 cacgcgccct gtagcggcgc attaagcgcg gcgggtgtgg tggttacgcg cagcgtgacc 3001 gctacacttg ccagcgccct agcgcccgct cctttcgctt tcttcccttc ctttctcgcc 3061 acgttcgccg gctttccccg tcaagctcta aatcgggggc tccctttagg gttccgattt 3121 agtgctttac ggcacctcga ccccaaaaaa cttgattagg gtgatggttc acgtagtggg 3181 ccatcgccct gatagacggt ttttcgccct ttgacgttgg agtccacgtt ctttaatagt 3241 ggactcttgt tccaaactgg aacaacactc aaccctatct cggtctattc ttttgattta 3301 taagggattt tgccgatttc ggcctattgg ttaaaaaatg agctgattta acaaaaattt 3361 aacgcgaatt aattctgtgg aatgtgtgtc agttagggtg tggaaagtcc ccaggctccc 3421 cagcaggcag aagtatgcaa agcatgcatc tcaattagtc agcaaccagg tgtggaaagt 3481 ccccaggctc cccagcaggc agaagtatgc aaagcatgca tctcaattag tcagcaacca 3541 tagtcccgcc cctaactccg cccatcccgc ccctaactcc gcccagttcc gcccattctc 3601 cgccccatgg ctgactaatt ttttttattt atgcagaggc cgaggccgcc tctgcctctg 3661 agctattcca gaagtagtga ggaggctttt ttggaggcct aggcttttgc aaaaagctcc 3721 cgggagcttg tatatccatt ttcggatctg atcagcacgt gttgacaatt aatcatcggc 3781 atagtatatc ggcatagtat aatacgacaa ggtgaggaac taaaccatgg ccaagccttt 3841 gtctcaagaa gaatccaccc tcattgaaag agcaacggct acaatcaaca gcatccccat 3901 ctctgaagac tacagcgtcg ccagcgcagc tctctctagc gacggccgca tcttcactgg 3961 tgtcaatgta tatcatttta ctgggggacc ttgtgcagaa ctcgtggtgc tgggcactgc 4021 tgctgctgcg gcagctggca acctgacttg tatcgtcgcg atcggaaatg agaacagggg 4081 catcttgagc ccctgcggac ggtgccgaca ggtgcttctc gatctgcatc ctgggatcaa 4141 agccatagtg aaggacagtg atggacagcc gacggcagtt gggattcgtg aattgctgcc 4201 ctctggttat gtgtgggagg gctaagcact tcgtggccga ggagcaggac tgacacgtgc 4261 tacgagattt cgattccacc gccgccttct atgaaaggtt gggcttcgga atcgttttcc 4321 gggacgccgg ctggatgatc ctccagcgcg gggatctcat gctggagttc ttcgcccacc 4381 ccaacttgtt tattgcagct tataatggtt acaaataaag caatagcatc acaaatttca 4441 caaataaagc atttttttca ctgcattcta gttgtggttt gtccaaactc atcaatgtat 4501 cttatcatgt ctgtataccg tcgacctcta gctagagctt ggcgtaatca tggtcatagc 4561 tgtttcctgt gtgaaattgt tatccgctca caattccaca caacatacga gccggaagca 4621 taaagtgtaa agcctggggt gcctaatgag tgagctaact cacattaatt gcgttgcgct 4681 cactgcccgc tttccagtcg ggaaacctgt cgtgccagct gcattaatga atcggccaac 4741 gcgcggggag aggcggtttg cgtattgggc gctcttccgc ttcctcgctc actgactcgc 4801 tgcgctcggt cgttcggctg cggcgagcgg tatcagctca ctcaaaggcg gtaatacggt 4861 tatccacaga atcaggggat aacgcaggaa agaacatgtg agcaaaaggc cagcaaaagg 4921 ccaggaaccg taaaaaggcc gcgttgctgg cgtttttcca taggctccgc ccccctgacg 4981 agcatcacaa aaatcgacgc tcaagtcaga ggtggcgaaa cccgacagga ctataaagat 5041 accaggcgtt tccccctgga agctccctcg tgcgctctcc tgttccgacc ctgccgctta 5101 ccggatacct gtccgccttt ctcccttcgg gaagcgtggc gctttctcat agctcacgct 5161 gtaggtatct cagttcggtg taggtcgttc gctccaagct gggctgtgtg cacgaacccc 5221 ccgttcagcc cgaccgctgc gccttatccg gtaactatcg tcttgagtcc aacccggtaa 5281 gacacgactt atcgccactg gcagcagcca ctggtaacag gattagcaga gcgaggtatg 5341 taggcggtgc tacagagttc ttgaagtggt ggcctaacta cggctacact agaagaacag 5401 tatttggtat ctgcgctctg ctgaagccag ttaccttcgg aaaaagagtt ggtagctctt 5461 gatccggcaa acaaaccacc gctggtagcg gtggtttttt tgtttgcaag cagcagatta 5521 cgcgcagaaa aaaaggatct caagaagatc ctttgatctt ttctacgggg tctgacgctc 5581 agtggaacga aaactcacgt taagggattt tggtcatgag attatcaaaa aggatcttca 5641 cctagatcct tttaaattaa aaatgaagtt ttaaatcaat ctaaagtata tatgagtaaa 5701 cttggtctga cagttaccaa tgcttaatca gtgaggcacc tatctcagcg atctgtctat 5761 ttcgttcatc catagttgcc tgactccccg tcgtgtagat aactacgata cgggagggct 5821 taccatctgg ccccagtgct gcaatgatac cgcgagaccc acgctcaccg gctccagatt 5881 tatcagcaat aaaccagcca gccggaaggg ccgagcgcag aagtggtcct gcaactttat 5941 ccgcctccat ccagtctatt aattgttgcc gggaagctag agtaagtagt tcgccagtta 6001 atagtttgcg caacgttgtt gccattgcta caggcatcgt ggtgtcacgc tcgtcgtttg 6061 gtatggcttc attcagctcc ggttcccaac gatcaaggcg agttacatga tcccccatgt 6121 tgtgcaaaaa agcggttagc tccttcggtc ctccgatcgt tgtcagaagt aagttggccg 6181 cagtgttatc actcatggtt atggcagcac tgcataattc tcttactgtc atgccatccg 6241 taagatgctt ttctgtgact ggtgagtact caaccaagtc attctgagaa tagtgtatgc 6301 ggcgaccgag ttgctcttgc ccggcgtcaa tacgggataa taccgcgcca catagcagaa 6361 ctttaaaagt gctcatcatt ggaaaacgtt cttcggggcg aaaactctca aggatcttac 6421 cgctgttgag atccagttcg atgtaaccca ctcgtgcacc caactgatct tcagcatctt 6481 ttactttcac cagcgtttct gggtgagcaa aaacaggaag gcaaaatgcc gcaaaaaagg 6541 gaataagggc gacacggaaa tgttgaatac tcatactctt cctttttcaa tattattgaa 6601 gcatttatca gggttattgt ctcatgagcg gatacatatt tgaatgtatt tagaaaaata 6661 aacaaatagg ggttccgcgc acatttcccc gaaaagtgcc acctgacgtc gacggatcgg 6721 gagatctccc gatcccctat ggtgcactct cagtacaatc tgctctgatg ccgcatagtt 6781 aagccagtat ctgctccctg cttgtgtgtt ggaggtcgct gagtagtgcg cgagcaaaat //