LOCUS       sequence-211715-        7041 bp    DNA     circular SYN 15-APR-2025
DEFINITION  CRISPR donor plasmid to tag human transcription factor ZNF586 with 
            GFP.
ACCESSION   .
VERSION     .
KEYWORDS    .
SOURCE      synthetic DNA construct
  ORGANISM  synthetic DNA construct
REFERENCE   1  (bases 1 to 7041)
  TITLE     White lab ENCODE plasmids to tag human transcription factors with 
            GFP
REFERENCE   2  (bases 1 to 7041)
  AUTHORS   .
  TITLE     Direct Submission
  JOURNAL   Exported Apr 15, 2025 from SnapGene Server 8.0.1
            https://www.snapgene.com
COMMENT     SGRef: number: 1; type: "Journal Article"
COMMENT     Sequence Label: pZNF586-donor
FEATURES             Location/Qualifiers
     source          1..7041
                     /mol_type="other DNA"
                     /organism="synthetic DNA construct"
     primer_bind     complement(34..50)
                     /label=M13 rev
                     /note="common sequencing primer, one of multiple similar 
                     variants"
     primer_bind     complement(34..50)
                     /label=M13 Reverse
                     /note="In lacZ gene. Also called M13-rev"
     primer_bind     complement(47..69)
                     /label=M13/pUC Reverse
                     /note="In lacZ gene"
     protein_bind    58..74
                     /label=lac operator
                     /bound_moiety="lac repressor encoded by lacI"
                     /note="The lac repressor binds to the lac operator to 
                     inhibit transcription in E. coli. This inhibition can be 
                     relieved by adding lactose or 
                     isopropyl-beta-D-thiogalactopyranoside (IPTG)."
     promoter        complement(join(82..88,89..106,107..112))
                     /label=lac promoter
                     /note="promoter for the E. coli lac operon"
     protein_bind    127..148
                     /label=CAP binding site
                     /bound_moiety="E. coli catabolite activator protein"
                     /note="CAP binding activates transcription in the presence 
                     of cAMP."
     primer_bind     complement(265..282)
                     /label=L4440
                     /note="L4440 vector, forward primer"
     rep_origin      complement(436..1024)
                     /direction=LEFT
                     /label=ori
                     /note="high-copy-number ColE1/pMB1/pBR322/pUC origin of 
                     replication"
     primer_bind     complement(516..535)
                     /label=pBR322ori-F
                     /note="pBR322 origin, forward primer"
     CDS             complement(join(1195..1986,1987..2055))
                     /codon_start=1
                     /gene="bla"
                     /product="beta-lactamase"
                     /label=AmpR
                     /note="confers resistance to ampicillin, carbenicillin, and
                     related antibiotics"
                     /translation="MSIQHFRVALIPFFAAFCLPVFAHPETLVKVKDAEDQLGARVGYI
                     ELDLNSGKILESFRPEERFPMMSTFKVLLCGAVLSRIDAGQEQLGRRIHYSQNDLVEYS
                     PVTEKHLTDGMTVRELCSAAITMSDNTAANLLLTTIGGPKELTAFLHNMGDHVTRLDRW
                     EPELNEAIPNDERDTTMPVAMATTLRKLLTGELLTLASRQQLIDWMEADKVAGPLLRSA
                     LPAGWFIADKSGAGERGSRGIIAALGPDGKPSRIVVIYTTGSQATMDERNRQIAEIGAS
                     LIKHW"
     primer_bind     1818..1837
                     /label=Amp-R
                     /note="Ampicillin resistance gene, reverse primer"
     promoter        complement(2056..2160)
                     /gene="bla"
                     /label=AmpR promoter
     primer_bind     2228..2246
                     /label=pBRforEco
                     /note="pBR322 vectors, upsteam of EcoRI site, forward 
                     primer"
     primer_bind     complement(2284..2306)
                     /label=pGEX 3'
                     /note="pGEX vectors, reverse primer"
     primer_bind     2406..2425
                     /label=pRS-marker
                     /note="pRS vectors, use to sequence yeast selectable 
                     marker"
     primer_bind     2619..2641
                     /label=M13/pUC Forward
                     /note="In lacZ gene"
     primer_bind     2633..2650
                     /label=M13 Forward
                     /note="In lacZ gene. Also called M13-F20 or M13 (-21) 
                     Forward"
     primer_bind     2634..2650
                     /label=M13 fwd
                     /note="common sequencing primer, one of multiple similar 
                     variants"
     CDS             3694..3714
                     /codon_start=1
                     /product="tobacco etch virus (TEV) protease recognition and
                     cleavage site"
                     /label=TEV site
                     /translation="ENLYFQG"
     CDS             3727..3771
                     /codon_start=1
                     /product="affinity and epitope tag derived from pancreatic 
                     ribonuclease A"
                     /label=S-Tag
                     /translation="KETAAAKFERQHMDS"
     CDS             3811..3834
                     /codon_start=1
                     /product="recognition and cleavage site for human 
                     rhinovirus 3C and PreScission proteases"
                     /label=HRV 3C site
                     /translation="LEVLFQGP"
     CDS             join(3862..3864,3865..3867,3868..4581)
                     /codon_start=1
                     /product="the original enhanced GFP (Yang et al., 1996)"
                     /label=EGFP
                     /note="mammalian codon-optimized"
                     /translation="MVSKGEELFTGVVPILVELDGDVNGHKFSVSGEGEGDATYGKLTL
                     KFICTTGKLPVPWPTLVTTLTYGVQCFSRYPDHMKQHDFFKSAMPEGYVQERTIFFKDD
                     GNYKTRAEVKFEGDTLVNRIELKGIDFKEDGNILGHKLEYNYNSHNVYIMADKQKNGIK
                     VNFKIRHNIEDGSVQLADHYQQNTPIGDGPVLLPDNHYLSTQSALSKDPNEKRDHMVLK
                     EFVTAAGITLGMDELYK"
     primer_bind     complement(3907..3928)
                     /label=EGFP-N
                     /note="EGFP, reverse primer"
     primer_bind     complement(4168..4187)
                     /label=EXFP-R
                     /note="For distinguishing EGFP variants, reverse primer"
     misc_feature    join(4619..5192,5193..5195,5196..5204)
                     /label=IRES2
                     /note="internal ribosome entry site (IRES) of the 
                     encephalomyocarditis virus (EMCV)"
     primer_bind     complement(4785..4802)
                     /label=IRES reverse
                     /note="IRES internal ribosome entry site, reverse primer. 
                     Also called pCDH-rev"
     primer_bind     5012..5031
                     /label=IRES-F
                     /note="IRES internal ribosome entry site, forward primer"
     CDS             5286..6089
                     /codon_start=1
                     /gene="aph(3')-II (or nptII)"
                     /product="aminoglycoside phosphotransferase from Tn5"
                     /label=NeoR/KanR
                     /note="confers resistance to neomycin, kanamycin, and G418 
                     (Geneticin(R))"
                     /translation="MGSAIEQDGLHAGSPAAWVERLFGYDWAQQTIGCSDAAVFRLSAQ
                     GRPVLFVKTDLSGALNELQDEAARLSWLATTGVPCAAVLDVVTEAGRDWLLLGEVPGQD
                     LLSSHLAPAEKVSIMADAMRRLHTLDPATCPFDHQAKHRIERARTRMEAGLVDQDDLDE
                     EHQGLAPAELFARLKARMPDGEDLVVTHGDACLPNIMVENGRFSGFIDCGRLGVADRYQ
                     DIALATRDIAEELGGEWADRFLVLYGIAAPDSQRIAFYRLLDEFF"
     primer_bind     complement(5349..5368)
                     /label=Neo-R
                     /note="Neomycin resistance gene, reverse primer"
     primer_bind     5959..5978
                     /label=Neo-F
                     /note="Neomycin resistance gene, forward primer"
ORIGIN
        1 gacctgcagg catgcaagct tggcgtaatc atggtcatag ctgtttcctg tgtgaaattg
       61 ttatccgctc acaattccac acaacatacg agccggaagc ataaagtgta aagcctgggg
      121 tgcctaatga gtgagctaac tcacattaat tgcgttgcgc tcactgcccg ctttccagtc
      181 gggaaacctg tcgtgccagc tgcattaatg aatcggccaa cgcgcgggga gaggcggttt
      241 gcgtattggg cgctcttccg cttcctcgct cactgactcg ctgcgctcgg tcgttcggct
      301 gcggcgagcg gtatcagctc actcaaaggc ggtaatacgg ttatccacag aatcagggga
      361 taacgcagga aagaacatgt gagcaaaagg ccagcaaaag gccaggaacc gtaaaaaggc
      421 cgcgttgctg gcgtttttcc ataggctccg cccccctgac gagcatcaca aaaatcgacg
      481 ctcaagtcag aggtggcgaa acccgacagg actataaaga taccaggcgt ttccccctgg
      541 aagctccctc gtgcgctctc ctgttccgac cctgccgctt accggatacc tgtccgcctt
      601 tctcccttcg ggaagcgtgg cgctttctca tagctcacgc tgtaggtatc tcagttcggt
      661 gtaggtcgtt cgctccaagc tgggctgtgt gcacgaaccc cccgttcagc ccgaccgctg
      721 cgccttatcc ggtaactatc gtcttgagtc caacccggta agacacgact tatcgccact
      781 ggcagcagcc actggtaaca ggattagcag agcgaggtat gtaggcggtg ctacagagtt
      841 cttgaagtgg tggcctaact acggctacac tagaaggaca gtatttggta tctgcgctct
      901 gctgaagcca gttaccttcg gaaaaagagt tggtagctct tgatccggca aacaaaccac
      961 cgctggtagc ggtggttttt ttgtttgcaa gcagcagatt acgcgcagaa aaaaaggatc
     1021 tcaagaagat cctttgatct tttctacggg gtctgacgct cagtggaacg aaaactcacg
     1081 ttaagggatt ttggtcatga gattatcaaa aaggatcttc acctagatcc ttttaaatta
     1141 aaaatgaagt tttaaatcaa tctaaagtat atatgagtaa acttggtctg acagttacca
     1201 atgcttaatc agtgaggcac ctatctcagc gatctgtcta tttcgttcat ccatagttgc
     1261 ctgactcccc gtcgtgtaga taactacgat acgggagggc ttaccatctg gccccagtgc
     1321 tgcaatgata ccgcgagacc cacgctcacc ggctccagat ttatcagcaa taaaccagcc
     1381 agccggaagg gccgagcgca gaagtggtcc tgcaacttta tccgcctcca tccagtctat
     1441 taattgttgc cgggaagcta gagtaagtag ttcgccagtt aatagtttgc gcaacgttgt
     1501 tgccattgct acaggcatcg tggtgtcacg ctcgtcgttt ggtatggctt cattcagctc
     1561 cggttcccaa cgatcaaggc gagttacatg atcccccatg ttgtgcaaaa aagcggttag
     1621 ctccttcggt cctccgatcg ttgtcagaag taagttggcc gcagtgttat cactcatggt
     1681 tatggcagca ctgcataatt ctcttactgt catgccatcc gtaagatgct tttctgtgac
     1741 tggtgagtac tcaaccaagt cattctgaga atagtgtatg cggcgaccga gttgctcttg
     1801 cccggcgtca atacgggata ataccgcgcc acatagcaga actttaaaag tgctcatcat
     1861 tggaaaacgt tcttcggggc gaaaactctc aaggatctta ccgctgttga gatccagttc
     1921 gatgtaaccc actcgtgcac ccaactgatc ttcagcatct tttactttca ccagcgtttc
     1981 tgggtgagca aaaacaggaa ggcaaaatgc cgcaaaaaag ggaataaggg cgacacggaa
     2041 atgttgaata ctcatactct tcctttttca atattattga agcatttatc agggttattg
     2101 tctcatgagc ggatacatat ttgaatgtat ttagaaaaat aaacaaatag gggttccgcg
     2161 cacatttccc cgaaaagtgc cacctgacgt ctaagaaacc attattatca tgacattaac
     2221 ctataaaaat aggcgtatca cgaggccctt tcgtctcgcg cgtttcggtg atgacggtga
     2281 aaacctctga cacatgcagc tcccggagac ggtcacagct tgtctgtaag cggatgccgg
     2341 gagcagacaa gcccgtcagg gcgcgtcagc gggtgttggc gggtgtcggg gctggcttaa
     2401 ctatgcggca tcagagcaga ttgtactgag agtgcaccat atgcggtgtg aaataccgca
     2461 cagatgcgta aggagaaaat accgcatcag gcgccattcg ccattcaggc tgcgcaactg
     2521 ttgggaaggg cgatcggtgc gggcctcttc gctattacgc cagctggcga aagggggatg
     2581 tgctgcaagg cgattaagtt gggtaacgcc agggttttcc cagtcacgac gttgtaaaac
     2641 gacggccagt gaattcgagc tcggtaccct gggattagag gcatgagcca cggttctcgg
     2701 ccacgtatat acctattctt aacagtccct gaccaaagga tgttgtgctc tagtcatgtt
     2761 ggggggggcc tggacatatt tatatagtac tcacacgtca tcagcaaata aggttccaca
     2821 ggcaagttgt ttgcaaatga aggagttata gaccctgcct ttattctgtc tgttgactca
     2881 tttagtcatg cccttgacaa tatgaggcct tctatatctg tgataatgct aagcagcccc
     2941 aacctcaacc tgaacccaac tccctgtttg tgcaaataat tccatagact agttttttgg
     3001 tttgtcagat actcttgtgg gtaggctgca tactcaacaa agtcaacatg tacctcacca
     3061 gcatttcttt gcttttaggt tgttggcatg gaggggaaga tgaggcagca ccttctaagc
     3121 agagcacgtg tatacatata tacaaagacc agggaggtca tagtggagaa aggccttatg
     3181 agtgtgggga atataggaaa ttatttaaga acaagtcctg cctcactgaa cccagaagag
     3241 atcacaaaca caggaatgtt cgcactggag aaaggcctta tgagtgcagc aaatatggga
     3301 aattatttca ccaaaagcct acactccata ttcatgagag atttcatact gggcaaaaga
     3361 cctatgagtg cagtgagtgt ggaaaatcat ttcaccaaag ctcttcactc ttgcagcgtc
     3421 agacacttca cactagagaa aggccttatg agtgtattga atgtgggaaa gcctttgctg
     3481 aaaagtccag tctcattaac cacaggaaag ttcactctgg agcaaagcgt tatgaatgca
     3541 atgaatgtgg gaagtccttt gcttatacat ctagtctcat taaacacagg aggattcaca
     3601 ctggagagag gccttatgag tgcagtgaat gtgggagatc ctttgctgaa aactccagtc
     3661 ttattaaaca ctgggattcc aactactgca agcgagaatc tttattttca gggcgccgcc
     3721 aaattcaaag aaaccgctgc tgctaaattc gaacgccagc acatggacag cggaggtgga
     3781 ggttcgagcg gtccctcggg ttcgtcgagc ctggaagttc tgttccaggg gcccctgtcg
     3841 tcgagcggtc cctcgggttc gatggtgagc aaaggcgagg agctgttcac cggggtggtg
     3901 cccatcctgg tcgagctgga cggcgacgta aacggccaca agttcagcgt gtccggcgag
     3961 ggcgagggcg atgccaccta cggcaagctg accctgaagt tcatctgcac caccggcaag
     4021 ctgcccgtgc cctggcccac cctcgtgacc accctgacct acggcgtgca gtgcttcagc
     4081 cgctaccccg accacatgaa gcagcacgac ttcttcaagt ccgccatgcc cgaaggctac
     4141 gtccaggagc gcaccatctt cttcaaggac gacggcaact acaagacccg cgccgaggtg
     4201 aagttcgagg gcgacaccct ggtgaaccgc atcgagctga agggcatcga cttcaaggag
     4261 gacggcaaca tcctggggca caagctggag tacaactaca acagccacaa cgtctatatc
     4321 atggccgaca agcagaagaa cggcatcaag gtgaacttca agatccgcca caacatcgag
     4381 gacggcagcg tgcagctcgc cgaccactac cagcagaaca cccccatcgg cgacggcccc
     4441 gtgctgctgc ccgacaacca ctacctgagc acccagtccg ccctgagcaa agaccccaac
     4501 gagaagcgcg atcacatggt ccttaaggag ttcgtgaccg ccgccgggat cactctcggc
     4561 atggacgagc tgtacaagta atgatctaga gtcgagttaa ttaagaattc cgcccccccc
     4621 cctctccctc ccccccccta acgttactgg ccgaagccgc ttggaataag gccggtgtgc
     4681 gtttgtctat atgttatttt ccaccatatt gccgtctttt ggcaatgtga gggcccggaa
     4741 acctggccct gtcttcttga cgagcattcc taggggtctt tcccctctcg ccaaaggaat
     4801 gcagggtctg ttgaatgtcg tgaaggaagc agttcctctg gaagcttctt gaagacaaac
     4861 aacgtctgta gcgacccttt gcaggcagcg gaacccccca cctggcgaca ggtgcctctg
     4921 cggccaaaag ccacgtgtat aagatacacc tgcaaaggcg gcacaacccc agtgccacgt
     4981 tgtgagttgg atagttgtgg aaagagtcaa atggctctcc tcaagcgtat tcaacaaggg
     5041 gctgaaggat gcccagaagg taccccattg tatgggatct gatctggggc ctcggtgcac
     5101 atgctttaca tgtgtttagt cgaggttaaa aaaacgtcta ggccccccga accacgggga
     5161 cgtggttttc ctttgaaaaa cacgatgata atatggccac aacctgttac attgcacaag
     5221 ataaaaatat atcatcacga acagtaaaac tgtctgctta cataaacagt aatacaaggg
     5281 gtgttatggg atcggccatt gaacaagatg gattgcacgc aggttctccg gccgcttggg
     5341 tggagaggct attcggctat gactgggcac aacagacaat cggctgctct gatgccgccg
     5401 tgttccggct gtcagcgcag gggcgcccgg ttctttttgt caagaccgac ctgtccggtg
     5461 ccctgaatga actgcaggac gaggcagcgc ggctatcgtg gctggccacg acgggcgttc
     5521 cttgcgcagc tgtgctcgac gttgtcactg aagcgggaag ggactggctg ctattgggcg
     5581 aagtgccggg gcaggatctc ctgtcatctc accttgctcc tgccgagaaa gtatccatca
     5641 tggctgatgc aatgcggcgg ctgcatacgc ttgatccggc tacctgccca ttcgaccacc
     5701 aagcgaaaca tcgcatcgag cgagcacgta ctcggatgga agccggtctt gtcgatcagg
     5761 atgatctgga cgaagagcat caggggctcg cgccagccga actgttcgcc aggctcaagg
     5821 cgcgcatgcc cgacggcgag gatctcgtcg tgacccatgg cgatgcctgc ttgccgaata
     5881 tcatggtgga aaatggccgc ttttctggat tcatcgactg tggccggctg ggtgtggcgg
     5941 accgctatca ggacatagcg ttggctaccc gtgatattgc tgaagagctt ggcggcgaat
     6001 gggctgaccg cttcctcgtg ctttacggta tcgccgctcc cgattcgcag cgcatcgcct
     6061 tctatcgcct tcttgacgag ttcttctgag tctgagagtt cacacaggag aaaggcctta
     6121 tgaatgcgtt gagtgtggaa aatcatttcg ccgaagctct tcactcttgc agcatcagag
     6181 agttcacact agagaaaggc cttatgaatg tagtgaatgt gggaaatcct ttagcttaag
     6241 gtccaacctc attcaccatc agcgagttca tactggagaa aggcatgagt gcgggcagtg
     6301 tgggaaatcc tttagccgaa aatctagcct tattatacat ctgagagttc acactggaga
     6361 aaggccttat gagtgcagtg actgtgggaa atcctttgct gaaaactcca gccttattaa
     6421 acacttgaga gttcacactg gagaaaggcc atatgaatgc attgattgtg gaaaatcatt
     6481 tcgccacagt tcttcgttcc gtcgccatca gagagttcat actggaatga ggccttataa
     6541 gtgaagcaaa ttttggaaat tctcttgccc aggctttttg ctccttcaag gccagagagt
     6601 tcacaccaga tcaaggtgtt atgagtgtga caaatgggga atattcttta gctagaatgc
     6661 tagcttcttt acataaaaga gtgctcccac tgaagaagtg ccttttgagt gcaatgaatg
     6721 tgagaaagcc ttcagccctc tctcattggt taccacaata tttacatgag gaaaatacca
     6781 cagatgtgga ggtaatatta ttttttcttc aatataacac tggaggaaac cccttatgag
     6841 gatgccatct gcctaaattg aatgtcatac atcaaatagc tgcatacatt ccaggtatgt
     6901 gggaactgca tagtattttt cgacctgccc aggtctcttg ctagacttct gtgacttaca
     6961 gttctcttct aaaaagcatt tcacctttac cacttggcag gtgcccacag tacatcattc
     7021 gcctaactca tcatgatcca g
//
